SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 39947.LOC_Os02g36220.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  39947.LOC_Os02g36220.1
Domain Number 1 Region: 479-808
Classification Level Classification E-value
Superfamily Terpenoid synthases 2.48e-76
Family Terpenoid cyclase C-terminal domain 0.0008
Further Details:      
 
Domain Number 2 Region: 248-457
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 1.76e-51
Family Terpenoid cyclase N-terminal domain 0.0004
Further Details:      
 
Domain Number 3 Region: 75-195,314-364
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 0.000000000000471
Family Terpenoid cyclase N-terminal domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os02g36220.1
Sequence length 821
Comment (Oryza sativa)
Sequence
MILPMSSACLGQFLRASPRGMIEQFNRAPPLRVSIRGAAGVEKSLGLGRNAGSQQGMQKN
QLQDKIRKQLREVQLSPSSYDTAWVAMVPVQGSHQTPRFPQCIEWILQNQHDDGSWGTNL
PGSVVNKDILLCTLACVVALKRWNTGRDHISRGLNFIGKNFWVAMDEQTIAPVGFNITFS
GLLNLATGTGLEFPVMQTDIDGIFHMRKIELERDAYGTASSRRAFMAYVSEGLGSLQDWD
QVMAYQRKNRSIFNSPSAAAATVIHGHNDSALCYLDSLVSKLDGPVPVMYPQNAYSQLGM
VDTLEKMGISNNFSCEISDILDMIYRLWIHNEEELMLDMGTCAMAFRLLRMHGYDISSDG
MAQFVEQSSFDDSIHGYLNDTKALLELYRSSQIRCLEDDLILQDIGSWSARVLQEKISSK
MTHKSEMLEVEYALKFPVYATLERLEQKRNIEQFKTKEQLKIEGFKLLKSGYRGAITHDE
ILALAVDEFHSSQSVYQQELQDLNSWVAQTRLDELKFARLMPSITYFSAAATMFPSELSE
ARIAWTQNCILTTTVDDFFDGDGSKEEMENLVKLIEKWDGHGEIGFSSECVEILFYAIYN
TSKQIAEKAVPLQKRNVVDHIAESWWFTVRGMLTEAEWRMDKYVPTTVEEYMSAAVDSFA
LGPTITSAALFVGPELSEEVFRSKEYIHLMNLANTIGRLLNDMQTYEKEIKMGKVNSVML
HALSHSGGGRGSPEASMEEAKREMRRVLQGSRCDLLRLVTRDGGVVPPPCRKLFWFMSKV
LHFVYMEKDGYFTADGMMASANAVILDPLQVTLLPSGLGTL
Download sequence
Identical sequences Q6Z5J6
LOC_Os02g36220.1|PACid:21917912 XP_015625948.1.37577 XP_015625949.1.37577 39947.LOC_Os02g36220.1 LOC_Os02g36220.1|13102.m03944|protein

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]