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Domain assignment for 39947.LOC_Os04g12280.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  39947.LOC_Os04g12280.1
Domain Number 1 Region: 193-444
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-96
Family Reverse transcriptase 0.001
Further Details:      
 
Domain Number 2 Region: 60-166
Classification Level Classification E-value
Superfamily Acid proteases 0.0000000000000221
Family Retroviral protease (retropepsin) 0.02
Further Details:      
 
Domain Number 3 Region: 10-45
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000628
Family Retrovirus zinc finger-like domains 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os04g12280.1
Sequence length 569
Comment (Oryza sativa)
Sequence
MAPAQPAPSAQAKKETGAKPGSSYNCGELGHFADKCPKPRRAGPRFAQARVNHASAEEAQ
ATPEVVLGTFPVNSIPATVLFDSSATHSLISKRFVGMHGLRNEELCTPMRVHTPGNSSTS
VSYSRSVLIEIQRSPFLANLILLESEDLDIILGMDWLTKFKGVIDCANRTVTFTKEKGET
VEKSSRKLEDIPIVCEYPEVFPEDLTTMPPKREIEFRIDLAPGTAPIYKRPYRMADNELA
EKKDNTKRMCVDYRALNEVTIKNKYPLPWIDDLFDQLKGAKVFSKTYLRSGYHQLRIREE
DIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLVKFVVVFIDDILIYSKSE
EEHEQHLRLVLEKLQEHQLYAKFSKCDFWVSEVKFLGHVITAQGVAVDPSNVESVTKWTP
PKTVSQIRSFLGFAGYYRRWLELIKDYGMSIHYHPGKANVVADALSRKSYYNALCTGGMC
KELQQELEHLNLGIVEHGYVAALEARPTLVDQVRAALVNDPEIAKLKNNMRVGKARDLLE
DEHGTIWLGERLCVPDDKELKDLILTEAY
Download sequence
Identical sequences 39947.LOC_Os04g12280.1 LOC_Os04g12280.1|13104.m01126|protein LOC_Os04g12280.1|PACid:21895438

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