SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 410358.Mlab_1748 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  410358.Mlab_1748
Domain Number 1 Region: 46-145
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 2.22e-21
Family Pentapeptide repeats 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 410358.Mlab_1748
Sequence length 310
Comment (Methanocorpusculum labreanum Z)
Sequence
MIECAQYRRIEEWNLAYEKYLKSEWERILPDEGYNLENIGKLFYYGSGFVRPGFQCKDFT
NAIQEGADFSSAHLYGADFSSAHLYGADFTYASLYEADFICSHLEDTNLFETILYGANLS
WASLIGADFICSHLERAIFHFSIVNGETQFTNSTIDDKTDFTGTSLSSARIEPELRTKLE
RNIRQIRWEEWYNDNKLLEIPARIFWKISDYGSSTRAILFTFLFSNVIFMMFYLALRDAG
LLEGSILSSGNDLLLAYMQTTLVPFGILGIDLTTLSLFPVFIIFLQVIFGYTILAALVTR
MAIMFQNLSP
Download sequence
Identical sequences A2SUA3
gi|124486560|ref|YP_001031176.1| 410358.Mlab_1748

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]