SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 416269.APL_0265 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  416269.APL_0265
Domain Number 1 Region: 34-222
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.11e-56
Family Extended AAA-ATPase domain 0.000000198
Further Details:      
 
Domain Number 2 Region: 243-359
Classification Level Classification E-value
Superfamily post-AAA+ oligomerization domain-like 2.21e-33
Family DNA polymerase III clamp loader subunits, C-terminal domain 0.0000789
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 416269.APL_0265
Sequence length 688
Comment (Actinobacillus pleuropneumoniae L20)
Sequence
MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK
GLNCETGITATPCGECANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQ
AQIANHLEFILQQENIPYESVAIEKLAKAAQGSIRDSLSLTDQAIAVSNANISLPIVQQM
LGLIDDHQPIELVTALAQADGEKAMAVIQSVAEKGIDWSQLLSDIAQTLHQIAMLQLLKN
NGQEQTQLHFLAKQIAPEDVQFFYQLMLNGKKELEFAPEQRAGVEMTILRALAFHPKRTE
ELNRHPVMEAAKATSAQPHTPQQNIEQLKARLNQNHTQQAVNSVQNVATQPVAKMPENPT
AYQQPAVNTTESGSTPVSPALAAMQARKQLQRTQAQLAQNEKKKPELVKPATLPASRANP
QKTPSLQERFMNLATEQQAQSRPQPTQQAAKPLSDEDYRWTWLNPELETQNESTKPSDIK
QAILQERTPELVAKTIALSCEQDEWCKIVNELKLGGLSRQVALNSYLAEKQGERLKLILK
PAMAHLDNAESRQSLATALQEKGFSYELSIGKSAEHKTPLEIRRAIFENLTLEAKKALTH
DEKLMLLRQTFDAEIDESTIRAVAENKE
Download sequence
Identical sequences A3MYY7
416269.APL_0265 WP_009875447.1.47094 WP_009875447.1.77337 gi|126207753|ref|YP_001052978.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]