SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 485918.Cpin_3534 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  485918.Cpin_3534
Domain Number 1 Region: 256-304
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000000000941
Family AraC type transcriptional activator 0.089
Further Details:      
 
Domain Number 2 Region: 42-175
Classification Level Classification E-value
Superfamily Regulatory protein AraC 0.00000124
Family Regulatory protein AraC 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 485918.Cpin_3534
Sequence length 309
Comment (Chitinophaga pinensis DSM 2588)
Sequence
MSQQLETLTDFYRERSFISFPFSTEDVGKGKSHFNVNTRKYCNFKTPYNRRDFYKITLIY
GKGELSYGGNSITIDRPALLLPCPSVPYAWASLSGEQDGFYCLFNQEFFNEHYQFDIFKR
SPLFKPWSEPVIFLEEKQRAQIHGYFEQMMEMAHSDYPYKYEALRNLLCLLMHSLLVDKP
VAEPGAGELSASSRLLKSFDELLHQQFPLDSPADPLTMRTPADFASSLNVHVNHLNHVVK
SITGQTTTHIIKSRILEEAKTLLLNTQWDISQVGYCLGFEDPAHFNNFFKKSAGITPLQF
RQSKMSVLI
Download sequence
Identical sequences C7PUK0
485918.Cpin_3534 gi|256422546|ref|YP_003123199.1| WP_012791171.1.2976

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]