SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 5270.UM01306.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  5270.UM01306.1
Domain Number 1 Region: 820-904
Classification Level Classification E-value
Superfamily YccV-like 0.00000000000101
Family YccV-like 0.012
Further Details:      
 
Domain Number 2 Region: 3-58
Classification Level Classification E-value
Superfamily F-box domain 0.0000000000235
Family F-box domain 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5270.UM01306.1
Sequence length 991
Comment (Ustilago maydis)
Sequence
MTAMLPDEVVYLIFSYLDPLSLRSVLQCNTTFYRIATTPALWELPYLLRWSTGDSKREAA
RGTDAWRKHRQLQRLAKHATQAAAEQSLTTASTSLSPFRNFQPNNGPVGDSAPPLKLDFY
RLFLERIRIDQEVLDTLYEQVVATHCYIPPVVALARKFGNDAKDVLAAVVEAQQSGPSWS
SSGFPDKAFSAATTQGNGKQLNKNDPLVYNADGYRLSAYRAHLPTTLRSETHHLVILHHA
REMLEHLQRREAMQRLSDLALPDPNTNTNINPNPNPESWSPHLGSTRSAKVFPSKQTEWA
ISLLTMFRGGEATYVENQLDILAAACDLYLQQRFPENSFTGLSVLEVAKGKATAICDFLA
DHGFRGAREDLFSDLDNHFLHHCFTTNRETLPLSLTLIFCGVANRLGLVTSLCNYPMRVL
ALVSLDPEAPLPTSAVTACAASEEMFWLDVCEYTTVAYDAHEPTAVDRFARRHSWLQQRP
PVLDHHDLVEWIHAMGIPNSADFWRPADPIKMVLRAADNILSSLQRARTAPRNQHPVGQA
RNALRNIELDRRSARLEQQWRELKRVDHTFLSLYHGRTDPVQHGAIADQIASALDGVAPA
IEEDETLWHVARTWRTESMRTLSSQPESWVLPSQTPSQQFRAWMDARAADNDWTLTRMHL
HRRSDHWSPHEQQAAKYAAVNAFLRLKRSMSASEVDWIAGSLQHYFMLDVDVIERDFLGL
GEADVGTSSEGDGGESKEGSDSSDEEDESSLRRLRISALTNRGILTSPNTRTVLSRMMKA
VWSQDAKVPRVDRRVRRQEQRNPKLTIGMPSAEQSKQLAHRVGTIFRHRTYRYAGSILCW
DPCCIAPEDWIVNMGVDRLPAPRTSTMMGRGGRHQPFYHSQVADGTLRYVADVNVELIHG
PIWIYGLPPNESTRRHSADEHVVEEGRTLGMSMHKMLQLRGIGEYFRCFDQVKGRFRRNE
YVRVRFPDDLSDTEEEEPKYGGSDSRSRSPK
Download sequence
Identical sequences A0A0D1CYL9
XP_011387219.1.11705 UM01306 5270.UM01306.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]