SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 561230.PC1_0677 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  561230.PC1_0677
Domain Number 1 Region: 227-535
Classification Level Classification E-value
Superfamily Tricorn protease domain 2 5.62e-28
Family Tricorn protease domain 2 0.034
Further Details:      
 
Domain Number 2 Region: 1566-1874
Classification Level Classification E-value
Superfamily 3-carboxy-cis,cis-mucoante lactonizing enzyme 1.15e-23
Family 3-carboxy-cis,cis-mucoante lactonizing enzyme 0.021
Further Details:      
 
Domain Number 3 Region: 869-978,1028-1241
Classification Level Classification E-value
Superfamily Nitrous oxide reductase, N-terminal domain 9.68e-22
Family Nitrous oxide reductase, N-terminal domain 0.032
Further Details:      
 
Domain Number 4 Region: 2361-2648
Classification Level Classification E-value
Superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase 6.51e-20
Family YVTN repeat 0.012
Further Details:      
 
Domain Number 5 Region: 1400-1483
Classification Level Classification E-value
Superfamily Cadherin-like 1.37e-17
Family Dystroglycan, N-terminal domain 0.041
Further Details:      
 
Domain Number 6 Region: 2843-2923
Classification Level Classification E-value
Superfamily Cadherin-like 9.94e-16
Family Dystroglycan, N-terminal domain 0.052
Further Details:      
 
Weak hits

Sequence:  561230.PC1_0677
Domain Number - Region: 2706-2816
Classification Level Classification E-value
Superfamily Bacterial adhesins 0.000174
Family Fibrinogen-binding domain 0.033
Further Details:      
 
Domain Number - Region: 3078-3138
Classification Level Classification E-value
Superfamily Cadherin-like 0.00267
Family Dystroglycan, N-terminal domain 0.037
Further Details:      
 
Domain Number - Region: 1281-1382
Classification Level Classification E-value
Superfamily Bacterial adhesins 0.00808
Family Fibrinogen-binding domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 561230.PC1_0677
Sequence length 3222
Comment (Pectobacterium carotovorum PC1)
Sequence
MTFSRSKSGSGLTRTPRQAWVLEPRMMFDAAAMTTAVDVAAHVAATETAPGVDATPVKAT
VTITDSSDSFAPIDLFSEVRVSADKGGHELKDLVITVNRTGANQAIVIDGTEITLEAANG
AKTTEGDGKYGYTVAVSGGATTITVSIASSDAFQPNDVAKLIDGIAYKPLDKTVAGGDVT
VTLKSLSDESDTADLNIHSTITIDSKINVAPVVSASDSPELAELIVVPGMEAPQDVRYSS
NGAYAYAIGSDGTLGVFTVGEHGKLTLSQTLSDISALKDVKDIALSADNRSLYAITGDKN
IVALSLDDNGQVIQVDGSYTQTTPSQNGNITGLAVSSDGTQVYATTQWNGMVVFTRDATT
GSLTLLQVVNDSGIDRSGIVASSGNYVVTIGMGAKHTLSVFQRSDTGKLISVATLETSGE
GYGAVDYQLAISKDQQFIYVADPDNGEISVYQLRDGTEGKTLARTDTKTLEGVNAVYLNA
DGSQLYALSSEGALQIYSVNASTGALSESGQITNIGDTRGMVLSPDGQSLLIAGEAIQRF
SALRTYLYGSDLPFADHIALSDSNLDVLNDGAGNYNGAVITIGRETPSADDQFGLSAGNN
LTLQDGKVLQSGTEIGTFTQNQGVLSVTFTADVTKETANAVLKQITYRNIGSQSATETVV
LTVTANDGELNSTVTTVALLLTANSAPTLVSQGGSSLTLDTRGASVTIFKDTAVNTGEAG
QALTKLSIGIDGLNNPHQEYLTVDGTVIDLSKDSAGTTVSGYQYSYTYNALSGESSLVLS
SVQGISSMAVMKLVDGLSYSTGKESTSASGLRTITLTELQDNGGTANGGSDTATLTVSGS
VNLAFNERPTIEATYSPDAALFYNDGKLSDYNERVSAISVSQDGKTLLVTGSEGNNNSGK
TYLRVYARDAESGKLTLLQSFTQGEQDDPSTPAIEVNGLNTITTLAQSKDGSSVYVAGGS
GSAYSLVQFSRDATTGLLSYVGVVATQGVNGVSGLDAAVSEIVLSEDGTSLYTINGVTPT
DGSTGKNAITFFSRDTTSGALTFVGSLVGSDTIPVRSPSGIVLSSDGTSAYISNLGNHSI
TVLSRDAATGSLNYVTTINKTTIAADANSAEIPKDDRYLTGLQDIVISPDNRFVYVSSNT
QGTVSIFSRDVDTGSLTYAGTLDLYNAGHIPANALSLRELVISEDGSALYVAALGSQSVL
VFGRDSDSGALTYRNSVELSINTVNHLAVSADGKNIYAGVSSFFAGLNVLNAAANAPYSQ
TTDAPFATSVTLSDQELDAADDYKGASIAISRNGEASANDRFAFQNGNGLTLSGNEIQYQ
GTTIGTFSVSEGTVKVVFTDSVTKTVANQVLHQVTYRNDGDAAGTSIPLNITFSDGGKET
SLLLTLVPNKPPVVDNVEYVPPSGTAGHSYSAELPEDLFRDPENGALTWQVNGLPAGLTF
DPETRTISGTPALNGAGSFSITVVATDGSGEQAERTLTLTVASDPAQIPTIGGESSALQN
DYNLEGYDSNSYVDVLSGVRDSQLSADGKTLYVVSSPESGSAVLSVFVRNEEGKFTLSKT
FYNYRSVYNDETGQLDKIVDNAALAGASDVTLSADGQYLYVVGSEGNAVTLFRIGSDGEL
TQAGVLDQAALGGHSLDVRSHIVSQGDYLYLTAAQSGSDNDSRSVLVFKRGTDGTLTSVS
QTDNLIGASRLVIDPTGRYLFVSGAGDTVGMVGITGFSIDAEGKLTQVSQIRAEGDDPYY
INSLALSPDGKTLYAINADGIQYTLNTITVGADGALSLVATVPFVNDGGDTGEALATGLV
VSADGTALFVIGKNISVFARAEDGSLTLKHTISGGWDSPLNISFSDLQNVELSVDGKQLY
LIGGDKVHVLNVGTAGATYTEKTDATVLLPSGRLSDPQLDALNNGTGNYNGASITVGRQE
GGLPEDTFGFKADNDLALDGNNIVKDGTTIATFTKVDGVLTVTFTAAVTKADAQNVLRQI
TYQNTSQDPEHAGSSPTFVFSINDGDNNVATMDVTVNLIGLNDPAVLTTTVLNPQIPGNG
EFVKLFKDTHIDTIESGQTIWQVVLTFDVSGPNETISVDGSTIVLEKSNGTPRTASGLQY
SVEVKDGKATVLLYVGKDGSGTAAIIDSIGYNYLGSDASGERHVTLMIKENNYSGSAPET
TLEQAITLTLVPAAETNTAPVITVPGTTPTYTERADPIVLAPDATVSDVQMDKLNGGKGN
YDGATLKITLGDGKTALDKLGFNAGNGLTLSGDTLQKDGVTIGQVSNKDGVLTIRFNANA
GTIPTTEDVQNTLRQVTYANDSHTPAAQVAVTVTLSDRYLESQVTALSVTITAINDTPVV
ANDPVLSADELRLVNAYTAIAGLGTVKSAARTTDGLALYVSDDKGAIALFKRDANSGELT
YVRTFAAVEGVGGISQLQVSADGNSVYALRADGNAIVWFGRDAEGNLEHKETIVDNYDIH
KSNLYDIKGITLSDDGKTLYVINNYNLLWFTRDTATGKLDYVGLIEGGMWSEPYLWQPSE
IVSRGNLLFVTTNTSSGSSLIVYTRGDNGEPTLLGYTRDVTDASGNTVQLSGLEQITVSA
DGRSIVVASADHIDAFALDTATGTFTHLARIAAEGTVNGIAFSADARVLYVTQSDGSLTR
YVLNGQALTKLDTLKNDGAGFAHLLPVDGGLIALGNGVTVLDEVSRLPVYRIDGPAVIVA
PSIVFSDAELDALNGGAGNYQGASITLQRGETASAGDRFDFTAGNGFTLANGVISKDGQA
VATFTQAEGKLTITFTAAISRADATALARQISWATSAPLTGNSTSLTLVLNDGETDSTAQ
TLGVTLSREINQPPVGHAELFTPPTAQVGTRWSYTLPNSLFSDAENDTLTLSINGLPNGL
TFDAATRTIGGDPAVSGTFNLTITATDSAGNATVLNVALTVNAASTPVDPGTPTEPANPD
NTATAAPVILVQQGVSLPADADEREREQPLGAIVADLSRPEAQALPTNIVAEPARQRDAG
STRQSDAPWVLDPVMSQLMPTLDQVNFSSRASTTVRDSAAVSPTDSNLFLSVRGQTTALE
SAFSSVQGALQPDASGALAFSLPQRMFSVREGNATLTLQLANGRPLPAWVQFDARSGVVR
ITDASAVQVNQIQLALKAQAADGTSRIVPITLQTGQGAGTEMATDRGAMQGPANPTIQPA
ESRDVERLAPAGKTAFTEQLRQHQPEQDALLAALSELSSLRT
Download sequence
Identical sequences C6D924
WP_012773377.1.10570 561230.PC1_0677 gi|253687078|ref|YP_003016268.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]