SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 593117.TGAM_1146 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  593117.TGAM_1146
Domain Number 1 Region: 4-124,240-396
Classification Level Classification E-value
Superfamily Substrate-binding domain of HMG-CoA reductase 3.14e-93
Family Substrate-binding domain of HMG-CoA reductase 0.00000161
Further Details:      
 
Domain Number 2 Region: 127-242
Classification Level Classification E-value
Superfamily NAD-binding domain of HMG-CoA reductase 8.5e-41
Family NAD-binding domain of HMG-CoA reductase 0.0000693
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 593117.TGAM_1146
Sequence length 406
Comment (Thermococcus gammatolerans EJ3)
Sequence
MEFEELVEKVVKGEVKLHQVEKYTDKRTATEIRRKALEKKLGVKLEHIGHYSIDPEQVIG
RNIENMIGVVQIPMGVAGPLKINGEYAKGEFYIPLATTEGALVASVNRGCSALTEAGGVK
TTLIDDKMTRAPLLKCPDARRAREVAEWVKENIDYLQEKAVSKVTRHGKLRDVKPFIVGN
NLYLRFEFETGDAMGMNMVTIASEEIMKVIEEEFPDVKYLALSGNLCVDKKPNAMNFING
RGKTVIAEAIVPREIVERKLKTTPELIAEVNYRKNLVGSAQAGSYGFNAHFGNIVGAIFL
ATGQDEAQITEGSHGITLAEVTPEGDLYISITMPSLEIGTVGGGTRVPTQREALSIMGVA
GGGDPPGTNAKKFAEIVAGAVLAGELSLLAAIAAKHLAKAHKELGR
Download sequence
Identical sequences C5A5Y6
gi|240103203|ref|YP_002959512.1| WP_015858761.1.60195 593117.TGAM_1146

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]