SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 59689.Al_scaffold_0001_2197 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  59689.Al_scaffold_0001_2197
Domain Number 1 Region: 92-179
Classification Level Classification E-value
Superfamily Cysteine-rich domain 1.45e-20
Family Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) 0.075
Further Details:      
 
Domain Number 2 Region: 157-238
Classification Level Classification E-value
Superfamily Cysteine-rich domain 0.000000000000146
Family C1-like domain 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 59689.Al_scaffold_0001_2197
Sequence length 322
Comment (Arabidopsis lyrata)
Sequence
MMRSKSIVINSNSRNNTSTVAATTALRRSASNTIAAAPVVRTNDLNKTPRPRSVEFPVSP
QLIQGEEMVHFGHPQHVLVKVELPDIYTCAGCKEEGAGVRYVCQECDYQLHEFCALAPPQ
LKSHPFHYQHQLLFFAKPAKGGIVKSKCDVCGRSPKGYTFRCKACSFQMHPGCAMLSPSL
SSSSLHHHPLRLLPSSSPGNITGGDSGGFLCGECKRGKRTGRVYRCTVCDYHLHAVCAKD
AAVNGLRANGHKGRDKSPAVLGTAARLASQVVIDFLGGIIDGLGEGVGEAIIDGVTRGGG
GGGGRGGGNGGVTREIPRVRGG
Download sequence
Identical sequences D7KJX3
XP_002893147.1.15461 59689.Al_scaffold_0001_2197 jgi|Araly1|880430|Al_scaffold_0001_2197

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]