SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 7739.JGI131603 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  7739.JGI131603
Domain Number 1 Region: 971-1159
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 1.28e-51
Family BCR-homology GTPase activation domain (BH-domain) 0.0000527
Further Details:      
 
Domain Number 2 Region: 418-607
Classification Level Classification E-value
Superfamily DBL homology domain (DH-domain) 1.09e-36
Family DBL homology domain (DH-domain) 0.00066
Further Details:      
 
Domain Number 3 Region: 613-694,764-798
Classification Level Classification E-value
Superfamily PH domain-like 0.0000000000000148
Family Pleckstrin-homology domain (PH domain) 0.015
Further Details:      
 
Domain Number 4 Region: 804-878
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 0.000016
Family Synaptotagmin-like (S variant) 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 7739.JGI131603
Sequence length 1187
Comment (Branchiostoma floridae)
Sequence
MNTMIGKILQDSIRKRKSPSTSPKISRREITVLHDTVVLSKYSPRDTVPIQQEHYPEDTA
ETSDSGDEGEEEDIEAAGARYLRQMSSVRRPTVTEIVTGNETESHDDDTDMEGGASEAEE
GPWTELKSESPPELTDQFDTLKHCWAVAFQHQNVPDFADLSRQEIDQHLRESRKSTDDLK
VRVENAEYCVKYLEYMQYVKSDQGEGVRGEGLATGPGSATVRNELRDSDEEFYSVDDLDR
EAIKAAMNQDSTSESASPTDQQAEDTPVHTPVDEEEEQSPMESERESVAESLSPIERDPF
GENKFGETSVRDSMISVESQNVGDICDLDEIDLDMDENNDKDNDVPKQLLTMTTNDRVSI
RIKRNYNIRSLGDRKSVISVDSISSDIPEDEVFESRRKDAVSPDNGVNTLNTSGNEDDHH
YRMRKLVMEGVLDTESVYLSCLDVLLKYKKIFEVSGTTSQPVLCAEDCALIFYKVRELHN
IHNDFHKGLQPKIRNFTPQQEVGDSFKLLVSQLPAYEDYLKNYERALQTIERCRRSNEQF
NSVAASVKNGDNHQTLEALIVRPVERVTRITLVLQDLLKHTPVSHPDHTPLKESLETSQV
FLDKINKSAFSAQGDKTDGISGPHRQLVKDAFLVELSDGKRKLRHVFLFPDLLICATQRT
TRKIFSRESMRESYECQWYIPLGELMLIAHDVQHIDSSPVPVTSEVDMENHKAKVAELRK
EYRKLKASNSDHPAQRKVAKGIEKVKKRLAEQEAALTLAFPSLPFRVFHKNGKTYTFLMS
SGDERAEWKEVITKLQEKCDEPALSGSLCVTVQSASGFTEEGRVHCLIEVDSFGHFEHKA
RTGTCSCTTEASWNEDFDVELEEAQTLRVSCYWEPPRGGSLKPNPQSPQGGRRSPIQKIG
GYRKQSMSHPLHHCGSADIELLKQSLEDNRRHPIEVVLNGKIRICLKLRHISQAATLKRQ
KSMAIKGQKGMFGVPLGTTTKIERRPIPQIVELCTQEVEKRGVEELGIYRISAVSSDVQK
LKKAFDTGSKDLHHMLQETDINAVAGVLKLYFRELPEPLFTNELYHSFADSLALADPDAK
ERSMLSLFHELPEVNHATALHMMRHLRRVAEKEEVNKMNVNNLSTVFGPTLLRPSETNSP
SEMSSAAFVGDVLTQVGVLQYLLMLPLSEDRRQALSSSGSVDTPICM
Download sequence
Identical sequences 7739.JGI131603

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]