SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 9823.ENSSSCP00000010618 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  9823.ENSSSCP00000010618
Domain Number 1 Region: 593-656,923-1042
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 1.07e-43
Family Ypt/Rab-GAP domain of gyp1p 0.0062
Further Details:      
 
Domain Number 2 Region: 21-199
Classification Level Classification E-value
Superfamily RUN domain-like 4.18e-32
Family RUN domain 0.00073
Further Details:      
 
Domain Number 3 Region: 1019-1141
Classification Level Classification E-value
Superfamily Ypt/Rab-GAP domain of gyp1p 3.66e-26
Family Ypt/Rab-GAP domain of gyp1p 0.0099
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 9823.ENSSSCP00000010618
Sequence length 1149
Comment (Sus scrofa)
Sequence
LQKTQQEKCRRKKQLPKHPKQVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRR
AAGFLRSNKIAALFMKVGKSFPPAEELSRKVQDLEQLIESTRNQIQGLQENVRKLPKLPN
LSPLAIKHLWIRTALFEKVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCAL
EYTKMKTSDHFWTDPSADELVQRHRIHSSHLRQDSPTKRPALCIQKRHSSSSMDDRPSLS
ARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGS
MGDLDYEKSVYWDYAMTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLL
QFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSESTSSDKEDDEATDYVFR
IIYPGMQSEFVASDPLGSTSPVSVGTAWMVVPVGRSVLVVARGSRWAQTRWDTTLPTSIL
KQQPPIPQDLMDVSVSNLPSLWQPSPRKSSCSSCSQSGSADGGSTNGCNHERAPLKLLCD
NMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGHGLTAGIWEQYLQD
STSYEEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMSE
WLGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMMHRDSTISNESSQSCSSGRQNIRL
QSDSSSSTQVFESVDEVEQVEAEGRLEEKQPKIPNGNVVNGTCSPDSGHPSSHNFSSGLS
EHSEPSLSTEDSVMDAQRSAPLVLRPRDSSMDDGQSSEATTSRDEVPREELAVQDSLESD
LMANESMDEFMSVTGSMDVALPEKEGTVMEGWRGSEVEKHNQVDSEDNLSEEPEMESLFP
ALASLAVTTSANNEASPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRNYWYFTPANLE
KLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPHGGAM
DTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELIYDDVFSVWETIWA
AKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLARDLVY
KVQTLIENK
Download sequence
Identical sequences ENSSSCP00000010618 ENSSSCP00000010618 9823.ENSSSCP00000010618

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]