SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 395962.Cyan8802_2304 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  395962.Cyan8802_2304
Domain Number 1 Region: 450-560
Classification Level Classification E-value
Superfamily SpoIIaa-like 1.37e-16
Family Anti-sigma factor antagonist SpoIIaa 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 395962.Cyan8802_2304
Sequence length 569
Comment (Cyanothece PCC 8802)
Sequence
MNSSRDDHHNHRLRQYIPILEWLPKYQLSWLKADLIAGLTSWAVMVPEAMAYGGIAGVPP
LIGLYTVPLPLFVYALLGTSRTMVIGPDSATALISSVIIGGLAARGSHEYLTLTATLAMI
VGLLFLGFGLLKMGWVANFIPIPVMQGFIQGLVWVTIIGQVPTIWGITGISGNFWQKLVK
ILHQLPQAHLTTSIMGLSSLALLLILKKFFPKIPGALVGIILSSLIVTVLGLRENTLELV
GEITTGLPSLTIPSVSFDQLQNLVPGGLAIVLLGYSQSLGAAKTAGEKIGGDIDPNQELI
SHGTANLGSALSSGFIVVGSLSKTSVAIEAGAKTQVSSLINGVLVILTLLFLMPLFHNLP
HATLAAIVIEAMLGLANFSYLKNLRHLSPVEFMVSMVAFFGVLFLGVLQGISLGIILSLM
LLIQRVSHPGTAVLGKLPNEEMYRDILRHPEAITIPGLLIFRISSDLIFPNANYFASQLK
KAIKQSNSSVKQVLIDGESINFIDTTALEMLTKLNRELQQQGIIVSFARVRDYIRDRMRR
SGLEQEIRTIYFYERISDGVKTFIEGENP
Download sequence
Identical sequences gi|257060128|ref|YP_003138016.1| 395962.Cyan8802_2304 WP_015784105.1.62203

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]