SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GSMUA_Achr11P24530_001 from Musa acuminata 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSMUA_Achr11P24530_001
Domain Number 1 Region: 21-241
Classification Level Classification E-value
Superfamily Ankyrin repeat 2.49e-45
Family Ankyrin repeat 0.0000823
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr11P24530_001
Sequence length 491
Comment pep:novel chromosome:MA1:11:24020443:24024491:-1 gene:GSMUA_Achr11G24530_001 transcript:GSMUA_Achr11T24530_001 description:"Ankyrin repeat-containing protein At3g12360"
Sequence
MTGTAMGADFDADLAEIRAAVVNDVNEVEETPLFTAAEKGFLDVVVELLKYSDRESLTRK
NRSGFDVLHVAARQGHQAIVQILLDHDPTLIKTFGQSNATPLITAATRGHTEVVNLLLEQ
DASLIELSKNNGKNALHFAARQGYVEIVKALLGKDPQLARRTDKKGQTALHMAVKGTSSE
VVKALVDADPAIVMLPDRAGNTALHVATRKKRAEIVNLLLLLPDTNVNALTRDHKTAFDI
VEGLPLSEESADIKECLSRCGACRANELNQPRDELRKTVTEIKQDVHIQLEQTRKTNKNV
HGIAKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGTQDTGVAVVVQKGSFKV
FFIFNAIALFTSLAVVVVQITLVRGETKAERRVVEIINKLMWLASVCTTVAFIASSYIVV
GRHFQWAAILVTLIGGVIMAGVLGTMTFYVVKSKRTRSIRKREKSMRRSASSSWHHNSEL
SDSEIDRIYAI
Download sequence
Identical sequences M0RV33
GSMUA_Achr11P24530_001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]