SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSMUA_Achr1P01230_001 from Musa acuminata 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSMUA_Achr1P01230_001
Domain Number 1 Region: 250-480
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.68e-38
Family Extended AAA-ATPase domain 0.078
Further Details:      
 
Domain Number 2 Region: 556-616,710-811
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.22e-16
Family G proteins 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr1P01230_001
Sequence length 1302
Comment pep:novel chromosome:MA1:1:912302:920444:1 gene:GSMUA_Achr1G01230_001 transcript:GSMUA_Achr1T01230_001 description:"Putative Midasin"
Sequence
MKYIYGFHYVLSCWYGLKSWSTTRMKLCIYMGTNISKHDTKKLREDSLLFLSMHIIRCVL
PMISRITDVHRCVSLVTMFLMRFFFSSYHLSTSIFPTCIGRGFMHWVIPIYIDLMADSTL
VLVDSQLTKLENYGWGDGVKQMSILTCNNIDSKEQFGINPFYISIVFTAYWYTDQDKLTQ
YTCSALSSLNKIIKNEYVSAFFMLVKLPVQMKISLLVSIGTFSLDNEFCCNECKHKGFEF
LAPTTSRNVLRVLRAMQLSKPVLLEGSPGVGKTSLVVALAEYSGHSVVRINLSEQTDMMD
LLGSDLPIQRDTGMEFSWCDGILLEALKKGSWVLLDELNLAPQSGLNAILDHRAEVFIPE
LGLTFKCPPSFRVFACQNPSHQGGGRKCLPKSFLNRFTKVYVDELDADDYLFICRSQYPS
VPETLLTKLICFNNRLHEDTMISRKYGQEGSPWEFNLRDVMRSCQIIEDTSKEASMDRFL
SIVYLQRMRTVADRHEVMKLYTEVFGVKPSVTQFPKVHVNPNYLILGSACVERNHFQPSK
VLKSQLNILPGILHNLEAVLHCVQCQWLCILVGPYSSGKTSLIRLLAHLTGNVLHELNLS
SGTDVTDLLGCFEQYNSFRSYRDVITQVERYVNEYFGLRLERDWKGLINERRNLFSKWFA
FLASKICNSHPTSLFPRLWKHDLCSSLNLLLVKTLLYIQKKGTMKPSANFEWVSGILIKA
IENGEWVVLENANLCNPTVLDRINSLVEPNGSITINECGLADGKPLVLHAHPKFQMFLTV
DPKHGEVSRAMRNRGVEIFVMQPTWLPDEEEDEEINVNDVKRFLICSGIPCSKLVLAMSK
AHMHVQSTGSCLGVRITLLELTRWVQLFQQLLMKGNQPKWSLQLSWEHTYLSSLGEAEGM
EAVMQAKLSYLSDTDWYSFNELSGYSLHLPGGWPAPLTLRHLLWYSRETCVRQNCIFLEF
LASQCASFKANMSCYGMLPSCMSQEFQPYATNDIEQFDLALANKMLFFAAHWSLEQATES
DVALYVLLFKWYSSKVQPYCNFFNSFLNILEKERDHPIWKYIRNCWKEVISHYKIDISAR
PLPVLSSEVVRLASEAMLKNCHEYLHNAMNCVGLLSLTYQQWTMERDSSCGEETLQYLLL
PVLNTLRCLEADVLEVIVESEELQLIYAELLEYHMLFWKSINASDYDLSSVTWNFLRKKV
MKLQPHFSKAVESILVEIHNLNHIPIWTFHMEKPTLWRYGGHPFLPASADVFYKMQQLLT
FCNVVWTRTKLLRLNFTDNLVIMKTVLSSDLDIRQLALQGAY
Download sequence
Identical sequences M0RW31
GSMUA_Achr1P01230_001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]