SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GSMUA_Achr3P08070_001 from Musa acuminata 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSMUA_Achr3P08070_001
Domain Number 1 Region: 132-189
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 4.21e-19
Family PHD domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr3P08070_001
Sequence length 216
Comment pep:novel chromosome:MA1:3:5679974:5687164:-1 gene:GSMUA_Achr3G08070_001 transcript:GSMUA_Achr3T08070_001 description:"Putative Protein polybromo-1"
Sequence
MAKTKPGRKDLDSYTIKGTNKVVRVGDCVLMRPAESEKPPYVARVEKIEADHRNNVRVRV
RWYYRPEESIGGRRLFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYF
CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEQAKKLDH
FLCSDCDSENDASRSINGFPASSVSEPKAEPKRRKR
Download sequence
Identical sequences M0SCS4
GSMUA_Achr3P08070_001 XP_009391478.1.42102

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]