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Domain assignment for GSMUA_Achr3P27590_001 from Musa acuminata 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GSMUA_Achr3P27590_001
Domain Number 1 Region: 12-65
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000113
Family PHD domain 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr3P27590_001
Sequence length 1196
Comment pep:novel chromosome:MA1:3:27119826:27128375:1 gene:GSMUA_Achr3G27590_001 transcript:GSMUA_Achr3T27590_001 description:"Putative Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment)"
Sequence
MIYQSVAIIHLVKVCDICGDSGQEELLAICSRCSDGAEHTYCMRIMLDKVPEGEWLCEEC
QLKEAENQMKGKSEAQFEALGSSISSKMKGENSEATSVTKEKIFEACSPSTGTSIPSKPN
LLSHENSFSKPDFVQVKPSALITSCSQSEGISRPVAHSKTSSDPDASKPHAHIEPPRGPL
SKSVSFNNLKVPKVKQLLVSIPQNKKMIKESNSSSSRKGPSQTITKSASFRNESSIVPSV
KTMSKSQSLNSPQPDNPRGVQQVKERSVVDKKTSTSNCRFVNPSVSATSVFSPKINSKVQ
QYDDKLKRASDSSNTGNNRVSIDATSSANEVKQQPSSCLSRASGRTSSMRLCKNEDQKLF
QLVPKPAELTHRDDKTKDHTSLSNSRQGASVGDRLQHFQRCKETDHSAQFCAVDKLRMSA
VKPSSEQSLRDMDNRSIKSKDAVEVLSWKFGTKRSVRSPDQSEEVSLSGTDVNSESTSSD
FTSNFLSSGNLPMVEGAADVHNFSKATNSIHMKQKMDDHKKTIICSREGASLDAADDLNM
KPIIQILLDQASFPTHPLKASVIPELEYIWQGAFEVLRTAKPPALFDGIQAHLSAYVSPK
ALEVATHFPCKVQLEEVPRLISWPLQFYENSPKEENIALFFFAKDTESYDKYYWKLLENM
LKNDLALIGNIDAVELLIFPSNVLPENSQRWNKLFYLWGVFRGRNKRSFTNLPDLEKKPS
ISNLKLEPTVRDLPTPAVSGLCSSIDISDENSQKLSRSDRSPKAKSSKFGNCIDLQNIPT
SGDENEVLNSEQPLVQKTFHQAIADDKVLTEQASCSLPASCSLKNISQLPSVAIAYPEPN
PQIPCVPLAYPELKPNINSGPVGYSEPKLQIDIERLPIEMENEPTSLDKLANDLDSKNDS
EHHVHASGTKISNCEDPANLFSLNCCQGNETDLQRIKQKENFITSEVVLYSQRSENVVQV
DSLSWESKPNRKRAQPSSVEMIRNSAGHMLKPTADAMQWKDEASCTSLSAEQHKKTRLDN
GGHAACRLKEETLSSKLSSKIQPLPSGLINDSVYHENVSESLRNAERYFPIDLSRATSAK
EDKLIYVLSSDDEDSPESSAPDLELALGGNRGPIKQDTLPLLSTQVVQGNLDKMPATAVD
DGDGSTALLSLSLAFPSSDRAQTAKPISQTQQLLPDKPCINTSLLLFGGYADSEHI
Download sequence
Identical sequences M0SIC5
GSMUA_Achr3P27590_001

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