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Domain assignment for GSMUA_Achr5P07140_001 from Musa acuminata 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GSMUA_Achr5P07140_001
Domain Number 1 Region: 256-334
Classification Level Classification E-value
Superfamily RING/U-box 1.06e-28
Family U-box 0.00014
Further Details:      
 
Domain Number 2 Region: 359-551
Classification Level Classification E-value
Superfamily ARM repeat 2.15e-24
Family Plakophilin 1 helical region 0.06
Further Details:      
 
Weak hits

Sequence:  GSMUA_Achr5P07140_001
Domain Number - Region: 106-185
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 0.0764
Family Coronavirus S2 glycoprotein 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr5P07140_001
Sequence length 628
Comment pep:novel chromosome:MA1:5:5158762:5162462:1 gene:GSMUA_Achr5G07140_001 transcript:GSMUA_Achr5T07140_001 description:"U-box domain-containing protein 13"
Sequence
MEEGENEAAVLAAAAAGSVVESLMAAVEEIAAISDYRNAYKKQFCNLSRRIKLLAPMFEE
LKESKDPIPPRAVRALEKLNGALDSAKDLLRLGSEGSKIFLVLERDRIMERFQEITSQLE
VALNEISFNEIDISDEVKEQVELVHAQFKRAKERIDTTDPELYADLSSVCHMNADARIDS
PILKRLAEKLQMMTISDLKQESLALHEMVDASGDPGEVIEKMSMLLKRIKDFVQTQKPEM
GTPMSAMVIPSHGTSKTPVVPDDYRCPISLELMGDPVIVSTGQTYEREFIKKWLEAGHNT
CPKTQQRLSSTSLTPNYVLRSLIAQWCEANGMDPPKLPARTGKPLSVCSAGEHAKVVDLL
HKLSSQNLEDQRSAAGELRLLAKRNTDNRICIAEAVHVLKRGSMEARENAAATLFSLSVV
DRNKGNKGKAVRAGVIHTLMGLLTDPEGAMMDEALAIMAILSSHPDGKAAIRAVEALPML
VKVIRSGSPRNKENAAAVLVHLCNGEQQQQHLAELQEQGMMVPLQEMVESGTNRGKRKAA
QLLEQMTRFLELQKKAEAQAQAQAQAQAWTQAPVDQSMDTASSAFTGNMSQVSKELFIIL
CHGVDVRLSPSIFMEESHLLNMAPQSTL
Download sequence
Identical sequences M0SWE3
GSMUA_Achr5P07140_001

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