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Domain assignment for GSMUA_Achr8P07850_001 from Musa acuminata 22

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GSMUA_Achr8P07850_001
Domain Number 1 Region: 228-616
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 1.92e-95
Family Regulator of chromosome condensation RCC1 0.0012
Further Details:      
 
Domain Number 2 Region: 14-123
Classification Level Classification E-value
Superfamily PH domain-like 4.43e-26
Family Pleckstrin-homology domain (PH domain) 0.0035
Further Details:      
 
Domain Number 3 Region: 615-685
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 6.24e-18
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr8P07850_001
Sequence length 1105
Comment pep:novel chromosome:MA1:8:5244296:5260011:-1 gene:GSMUA_Achr8G07850_001 transcript:GSMUA_Achr8T07850_001 description:"Putative Probable E3 ubiquitin-protein ligase HERC1"
Sequence
MADLLGSANADRDIDKALIALKKGAQLLKYGRKGKPKFCPFRLSNDESTLIWFSGGGERT
LKLASVLRIVPGQRTPVFQRYLRPDRDYLSFSLIYNDGKRSLDLICKDKVEAEVWFSGLK
ALISTGQYGRSKIDGWNNGGLNTDDSRGSASNSISDQSIGSTLDSSESRLTSSSIPKNLS
FEYSVTSDISDATNMHVKGVSSDGFRVSISSVPSTSSHGSAQDDFDAAGDVYVWGEVICD
TSTRISADKNSSPSSARSDILLPKPIESNVVLDVHHVACGVRHAALVTRQGELFTWGEES
GGRLGHGVGMDIIHPRLLESLSTFNVDYVACGEFHTCAVTATGELYTWGDGAHNAGLLGH
GTNVSHWMPKRVSGPLEGLQVSYVSCGVWHTAIVTTAGQLFTFGDGTFGVLGHGNRETVL
YPREVESLAGLKTIAVSCGVWHTAAVVEVMVTQSSASSGKLFTWGDGDKYRLGHGDKVAR
LKPTCVPSLIDYNFHRLACGHSLTIGLTTSGQVFTMGSNVYGQLGNPRSDGKLPCMVEDK
LAGEPVGEVACGSYHIAVLTTRGEVYTWGKGANGRLGHGDFEDRKTPTLVEALKDRPVKQ
ISCGSNFTAAICQHKWISGAEQSQCSACRQAFGFTRKKHNCYNCGLVHCHQCSSRKALRA
ALSPNPGKPYRVCDSCYVKLNSGLEPGGVNNKKNAKPWISTESKDKFDKVDTLPKASLSR
NLELIKSLDIKTAKNGKNTNFMYMTQNPKGSSVSPLKSLAFPGGIDMLQAVSKPVQTTGA
NSANRSRAVSPFSRKSSPPRSTTPTPTTSGLSFTKNISDSLKKTNDLLNQELLKLRSEVD
SLRQRCERQDFELQKAEKKAKEAMTVAAEESTKSKAAKEVIKSLTAQLKEMAERLPHGTY
GTNTTIPMHLPNGVESHAIQHIGSSGEHLFINDAGNIANMAPSRTGYLGQINENSGDNTS
VREIYRPNETSAPPTPKIVNAKMEQNLNPQNAGQGEMWASSTRLKDIDSRTIASPQSHDD
AVSAVRSPSELSNDVEAEWIEQFEPGVYITLVTLRDGTRDLKRVRFSRRRFGEQQAEAWW
SENRERVYEKYNFRVPDRTSSAMLT
Download sequence
Identical sequences M0TNI8
GSMUA_Achr8P07850_001 XP_009411942.1.42102

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