SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for GSMUA_Achr8P22950_001 from Musa acuminata 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSMUA_Achr8P22950_001
Domain Number 1 Region: 267-446
Classification Level Classification E-value
Superfamily Ankyrin repeat 2.71e-45
Family Ankyrin repeat 0.00026
Further Details:      
 
Domain Number 2 Region: 45-234
Classification Level Classification E-value
Superfamily cAMP-binding domain-like 1.05e-40
Family cAMP-binding domain 0.00034
Further Details:      
 
Domain Number 3 Region: 3-42
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 0.00000132
Family Voltage-gated potassium channels 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GSMUA_Achr8P22950_001
Sequence length 541
Comment pep:novel chromosome:MA1:8:27468231:27476744:-1 gene:GSMUA_Achr8G22950_001 transcript:GSMUA_Achr8T22950_001 description:"Potassium channel SKOR"
Sequence
MITGYGDIHAVNPREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTERFRDKMKDLIRY
MNRNRLGKDIRDQIKGHVRLQYESSYTEASVLQDIPASIRAKISQTLYRPCIENVPLLKG
CSSEFINQIVIRLQEEFFLPGELILEQGNAVDQLYFVCHGVLEGIAVGEDGSEETVTQLE
PSSSFGEIAILCNIPQPYTVRVCELCRLLRLDKQLFTNILEVYFVDGRTILSNLLEGNES
TLRIKQLESDITSHIGKQEAELALKVNSAAYYGDLRHLKGLIRAGADPKKTDYDGRSPLH
LAASGGFEDITIFLIREGVDINLSDNFGNTPLLEAVKHGHDRVASLLHSKGAKLHLKDAG
SQLCAAVARGDSDFIRRILNYGVDPNSSDYDHRTPLHIAAADGLYSIAKILLEAGASVFA
IDRWGSTPLDEAVKCGSKSLMMMLEDAKLEELSKFPDRGTQTQDKTQPRRRCTVFPFHPW
DPKEKRKEGVVLWVPLTMEELIESSQELLNCSGSRILSEEGGRISDVAMICDNQKLYLVA
D
Download sequence
Identical sequences M0TSU8
GSMUA_Achr8P22950_001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]