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Domain assignment for APC4830 from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  APC4830
Domain Number 1 Region: 1047-1196
Classification Level Classification E-value
Superfamily Nucleotide cyclase 1.41e-43
Family GGDEF domain 0.0000633
Further Details:      
 
Domain Number 2 Region: 189-379
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000000139
Family Nitrogenase iron protein-like 0.062
Further Details:      
 
Domain Number 3 Region: 701-788
Classification Level Classification E-value
Superfamily TPR-like 0.00000474
Family Tetratricopeptide repeat (TPR) 0.052
Further Details:      
 
Domain Number 4 Region: 6-121
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.0000207
Family Protein kinases, catalytic subunit 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) APC4830
Sequence length 1206
Comment $ MCSG $ SQ11138 $ PDBT56879 $
Sequence
MWKVRVKKFLRETYWGDEFLIEDDGEDQVLKIVRAPVDRSFFFNEYAKLKRLNLPNVLLP
EKLKISDGKFLLFYPYYHNLAPLENLSDQVAKQLLKLFLFLSKVGVTIPALGMDDILVND
GVFLIPALISNIPDDVKGVVFSPERSSRATEEVCRRFLKIHGIEPHLETREPSFDSREIR
IPYIHRKEEELIKRDIEIAQKFPFFILITGEQRVGKTKLASVLVDGLREQGYMVHQITSL
EDLRVWYDASDELDLLTKLDDGQKKVILIDDLFEGSDLLSFLEEFSGLSTITKIIVLTTS
TKAFQFFHKVYRLSPFTVEETRIFLERAIGKISEDQVKLIHSLSKGLPGYMVELLKFFNK
SNLRENIVGIFKPLLRELDSPEIRELSVLGQKFTGTELKVLEKITGKDYHDTLMSAYDSG
VITTEEGLYRFALREFWKYYYNKLSENKKKNLHEKLFENLPDDLAIKHALSLEDPRLKFF
YVLRYVRKHFWDYEKTRSLIEYLRRLEEFFEKPYYSIESLKMKLIFRIDPLGVEKENFHF
RRFKTLRNPDVESILQKDSLSYYDLYNLVVLSRFHIRAGKKAPQEILNTIKRELKEKNFS
TRERLYLKAHLLYDLFSSTEDREALKEMMNIATSEGFLDLQVMGYRALGVLSRTRAMSNY
YFHHSLELSRKIDPSLSIVDESNLTWSLLYEGKITNFLVQLERLRKQARLFEDMPILSYT
YFLEGLYYIHKKDFQKAEEVFRTELELEEKHGIERRALRGLVMNYLFSGDVESAKSLLEK
DEPEFDRFGFNFLKRLVLAKDDSELLKIWKERLETPQKFFNEEIAYVFTERLAKLDPEGF
EEFLLELERENVENSSNLTLALVYETFYKFYSALGENFKAKRYLRRAIFVYNLIGLREVS
VKPEVEEKTQIEEKKAPFYLLLGFIETEKEFSDMMEFASARLSEVIPYEVFSIRIIERTT
KKVMEEYSTSPITPPMEKDFLEISPFRTVMSFHLDMKHDMIVGVETNLECDEKTAWELVE
TLEQFGNILTTILRERLYRDRSMKDPLTGVLSRWYFMERLEEEAYKSSRYKSPLSIIMCD
ADDFKKINDQFGHVAGDKTLGWLGRKMKSVLRKSDLVGRYGGEEFIIALPGTSLEEAKIV
AEKLRKAVMEDPENTYHITLSFGVAEYKNGEDPFETIKRADEALYLAKILGKNSVVTEKV
LSRRSS
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Identical sequences Q9X1T0
gi|15644342|ref|NP_229394.1| gi|15644342|ref|NP_229394.1| NP_229394.1.35502 WP_010865368.1.29620 WP_010865368.1.45724 WP_010865368.1.51363 WP_010865368.1.56403 WP_010865368.1.79805 243274.TM1594 283451 APC4830

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