SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for C49H3.5 from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  C49H3.5
Domain Number 1 Region: 10-73
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000924
Family RING finger domain, C3HC4 0.000081
Further Details:      
 
Domain Number 2 Region: 102-188
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000176
Family Canonical RBD 0.00025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) C49H3.5
Sequence length 796
Comment $ SECSG $ SQ42851 $ PDBT1457 $
Sequence
MSTCSDESCDKECPLCMETLELDDINFYPCKCEYQICRFCWHRIRTDENGLCPACRQPYP
EDPVNFKPMTTDDVRKHKDEQRLKKQAEKLKLSDARQYLCNYRVLQKNLVYVVGLSPRVA
DPEILKKNEYFGRYGKIQKIVTSATPSLPAPHLPPSHTAYVTYKRVDDALRAIQGVHNSM
LDGRLVKASLGTTKYCSSFLNSRKCFKPVGECMYLHENAEAEISFTKDDMHLGKHTEYEK
RLIESMNSRPPPPQSTLASQLDKILAPTSNSPRRYLEDDSDTVDDVERTGSAIHMCADDP
DDDDADSTNTSNSIDDPAPSNPADETVNSRRSNQTARERQWSERDEISVAPSNTPPTDPE
GNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKHQEAPAPLMQWEA
LLGLSSPSAQSTIVEPSSLFPTFKMDSGFNSQSLFGTHTSSTPSFRREASPPPGLARFNS
DDDLGFDPFTESSKGLSALLQEEQEQIPPHNSASNHTLDVLKQLFGQLPEQRQSTQQHPQ
HLQSSHQQHPLQQNQDQHHSFLHQLHAQQQHQQQQFAADMNRQQDYMYSRLMSQQQQQSQ
QQRQFDSTPGFSHPFGSMQQQQQSSQQQQHQSQSSQSSSLLQDLFNRQQQQHQAQQQAQQ
HQQQQMYAGINSYMYNDMLMPRVPFGMAPPPGLGGPSTNRSSTTQQAPPHMTQQSQQQQQ
QQQSSMGLFGMGGHQSMMQDHQSQQPQSAQDAFKALLPNVNVRFMDDNSMSRWSHENSLR
SSAVPPPPGFSSVMNR
Download sequence
Identical sequences Q9GYQ9
6239.C49H3.5a C49H3.5a.1 C49H3.5a C49H3.5a NP_741453.1.50509 C49H3.5

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