SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for RR333 from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  RR333
Domain Number 1 Region: 762-841,937-1146
Classification Level Classification E-value
Superfamily ClpP/crotonase 1.11e-62
Family Tail specific protease, catalytic domain 0.00000303
Further Details:      
 
Domain Number 2 Region: 16-268
Classification Level Classification E-value
Superfamily Tricorn protease N-terminal domain 1.44e-25
Family Tricorn protease N-terminal domain 0.0000371
Further Details:      
 
Domain Number 3 Region: 300-417,498-627
Classification Level Classification E-value
Superfamily Tricorn protease domain 2 2.09e-17
Family Tricorn protease domain 2 0.0055
Further Details:      
 
Domain Number 4 Region: 847-923
Classification Level Classification E-value
Superfamily PDZ domain-like 0.00000000000064
Family HtrA-like serine proteases 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) RR333
Sequence length 1171
Comment $ NESG $ SQ142945 $ PDBT144016 $
Sequence
MRGARKSMGRVSYLRLPHLSGDQLCFVAEDDLWLASLDGPGRAWRLTVDRTKAGPPRFSP
DGRHIAYTSWRTLVPEVHLVPVDGGPGRQLTHWGGLDTRVCGWSPPDPDGTTAVLAVASH
GEPFSHLTWAYKVTPDGDPGRKLPWGPVTDIQAADLDGERRTLLLTGTPPHEPAAWKRYR
GGATGRLWLHGERLLPDLGGHLSAPMFVGGRIAFLSDHEGVGNLYSCAQDGTGLRRHTDH
DAFYARNAASDGTRVVYQCAGDLWIVDDLAPGSAPRRLDVRLSGPRAGRRTHQVPAAQHV
GGISVDETGRASAVVVRGSLYWLTHRDGPARTIADTPGVRVRLPEMLGESGRIAYVTDAE
GEDAVEISYLPRATGGRAARRLASGRLGRVLELVSDPAGDRLAVASHDGRLLILDVAEPD
TEVTLALEAVDAGYPPDAGDEDAAGTAARADSAPDAPAEDTDARDIAAGTGTGDIADADA
AAGGTVTPGSPGTPATAGGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKM
ARIDGPEGTLVVDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRP
YLVPLSSATPSPFALNPEGRPAAGGLDPLEDEPGEGGAVMVEVEGLESRVTPFPVTASKY
SALEPVAGGGLVWLRWPISGALGETFANPADPSERPTLEHFNLAKAKKSELVDHLDWFRV
SGDGSRLVVLDEGELRAVPASEVGDGDSTTWIDLRRILHEVDPAAEWRQAYDEAGRLIRA
YFWDPGMCGIDWDAVLDQYRPLLERVASPDEFADLLREVLGELGTSHAYVVAARRNEGPA
HYQRWQGLLGANLACRDGRWLVRRILPGDSSDSKARSPLAGTGIRDGAVLTHVDGRPVDP
VLGPSPLLAGAGGTTVELTFAPAEGCQGPSRRVAVVPLVDERPLRYQDWVAKRREVVREL
SGGRCGYLHIPDMGGSGWAQFNRDLRMEVSRPALIVDVRGNAGGHISELVIEKLTRTILG
WDLTRDAQPVSYTSNAPRGPVVAVADEATSSDGDMITAAFKLLRLGPVVGQRTWGGVVGM
TGRHRLGDGSVITVPMNAAWFDAYGWSVENYGVAPDVEALRTPLDWAEGRYPVLDEAVRL
ALELLETNPPATPPGYEAVPDRSRPPLPPRE
Download sequence
Identical sequences Q9RKB9
NP_627384.1.49638 RR333 gi|21221605|ref|NP_627384.1| 100226.SCO3168

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