SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|52425237|ref|YP_088374.1| from Mannheimia succiniciproducens MBEL55E

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|52425237|ref|YP_088374.1|
Domain Number 1 Region: 10-233
Classification Level Classification E-value
Superfamily PLP-binding barrel 5.63e-66
Family Alanine racemase-like, N-terminal domain 0.0000116
Further Details:      
 
Domain Number 2 Region: 227-356
Classification Level Classification E-value
Superfamily Alanine racemase C-terminal domain-like 1.33e-44
Family Alanine racemase 0.0000571
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|52425237|ref|YP_088374.1|
Sequence length 357
Comment alanine racemase [Mannheimia succiniciproducens MBEL55E]
Sequence
MKPATVKISSVALKHNIQIIKQKAPHSKIIAVVKANAYGHGVEFVSSTLENLVDGFGVAR
LAEALSVRSNGVTKPILLLEGFFSPKDLPILSVNNIQTVVHNQDQLDAIKRANLENPIKV
WLKIDTGMHRLGVSLEEVDYYYNELMNCPNVDEVGFVSHFSRADETDSDYTNIQLNRFLD
ATKNKKGNRTIAASGGILFWEDSHLEYIRPGIIMYGVSPINIPSSEYGLIPVMTLTSSLI
AVRDHKKGEPVGYGGIWVSERDTKIGVVAIGYGDGYPRNVPAGTPIYINGRRVPIVGRVS
MDMVTVDLGPDCKDKVGDEAVLWGKELPIEEVAEITGLLSYELMTKLTPRVLTEYVD
Download sequence
Identical sequences Q65TC1
221988.MS1182 WP_011200356.1.101358 WP_011200356.1.33615 gi|52425237|ref|YP_088374.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]