SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|22297840|ref|NP_681087.1| from Thermosynechococcus elongatus BP-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|22297840|ref|NP_681087.1|
Domain Number 1 Region: 16-226
Classification Level Classification E-value
Superfamily Ribosomal protein L1 3.01e-76
Family Ribosomal protein L1 0.000000634
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|22297840|ref|NP_681087.1|
Sequence length 237
Comment 50S ribosomal protein L1 [Thermosynechococcus elongatus BP-1]
Sequence
MRKLSRRLRELYAKVEDRPYAPLEALQLLKETATAKFPESAEAHIRLGIDPKYTDQQLRT
TVALPKGTGQTIRVAVIARGEKVTEASAAGADVVGSEELIDEIQKGRMDFDLLIATPDMM
PQVAKVGRILGPRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRADRSGIVHVLFGKASFS
AEDLLVNLKALQESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKLAEAA
Download sequence
Identical sequences Q8DM27
NP_681087.1.97157 gi|22297840|ref|NP_681087.1| 197221.tlr0296

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]