SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|22298116|ref|NP_681363.1| from Thermosynechococcus elongatus BP-1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|22298116|ref|NP_681363.1|
Domain Number - Region: 116-170
Classification Level Classification E-value
Superfamily Nicotinate/Quinolinate PRTase N-terminal domain-like 0.0647
Family NadC N-terminal domain-like 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|22298116|ref|NP_681363.1|
Sequence length 596
Comment porin [Thermosynechococcus elongatus BP-1]
Sequence
MRSNIVKKTYLLASSLGLLGVVAGANIATANEPVKLENLSAAEPQNLQVSEALPAPNTVA
DASSTIRSVNELLANEESMGQVTSVSQLSDVRPTDWAYQALASLVEKYGCIAGYPDGTFR
GNRAATRYEMAAALNACLDVISDRFATKEDLATLQKLMDEFKAELATLRGRVDKLEARTA
ALEATQFSTTTKLTGTAVMSVQFGGRPSSPLPSVRPNDPITGVPLPLAPGRTNPTVIAGV
LLNLNTSFTGTDLLQTTLSTGNGGLDAISTYGLGSQIISTLGTGDAFTAPLPYFSPSQYY
WSNFGPGVTLYRLAYSFKPTKDITITAGPQFYPSDIIDTNSWANSPASDFGSYFFINNPF
IVPYAMNYLGGAGAAIQWNPKEGPFTVRALYIAAGAGTAAAGIAPPNPGGGFAGDPFQAS
LELEYANTFGNGRNSYAVKLQGTYSKTYGIEAQAGGVNFELNLGRLGIFGRAGVAGIPST
YFPGVSPLPFSIGPFPAAGMMAYNFMAGIGYKDLLVPGSVLAVAAGAPFINSAPAVPPIN
NANQVNVEAFYKFPISDNISITPIFTAIINPNNTNGAGAISGQPILQGVIRTTFTF
Download sequence
Identical sequences Q8DLC3
NP_681363.1.97157 197221.tll0573 gi|22298116|ref|NP_681363.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]