SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|22298380|ref|NP_681627.1| from Thermosynechococcus elongatus BP-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|22298380|ref|NP_681627.1|
Domain Number 1 Region: 277-348
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.15e-16
Family Pentapeptide repeats 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|22298380|ref|NP_681627.1|
Sequence length 409
Comment hypothetical protein tlr0837 [Thermosynechococcus elongatus BP-1]
Sequence
MIGLIPLGQILMGEDNMTLRENQTASALRPSKVLAARNRWRMGWQSLRSVLLPVAMVAVL
VAWGLDWHGGGVVAALVLGGLSFPLVWTSAYHWFTEDLTEEQRQFILASLGLSLAVVALM
AMTGAMDWIRARFQGTNWEAVGALAEGFGALGQILVALLAAYVAWRQYVISRDLTIQQNR
ITQQQTIDSYFQGIADLILDDEGLLEDWPPERAIAEGRTAAILAGLDAEGKAKVIRFLSG
AKLLSPLKRDRRLGRPIFDGLGGYEEDIEYGVRVINLGSMLAGADLSGTDLRWTELSDAN
LTGALFRNCNLTRANLAGAILQGADFTNADLSRVRLFYGTVEQASPRDRLNPPNFRTGAQ
TGAVVEDVNFTNVKNLSEEQRYYCCAWSGSRSRETIPGGCEGIPNKLGR
Download sequence
Identical sequences Q8DKM2
197221.tlr0837 NP_681627.1.97157 gi|22298380|ref|NP_681627.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]