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Domain assignment for gi|571028776|ref|YP_008900896.1| from Thermosynechococcus sp. NK55

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|571028776|ref|YP_008900896.1|
Domain Number 1 Region: 399-559
Classification Level Classification E-value
Superfamily cAMP-binding domain-like 9.69e-36
Family cAMP-binding domain 0.0025
Further Details:      
 
Domain Number 2 Region: 296-393
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 1.11e-23
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0026
Further Details:      
 
Domain Number 3 Region: 228-292
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 5.89e-19
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.00071
Further Details:      
 
Domain Number 4 Region: 143-225
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0000000000000863
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|571028776|ref|YP_008900896.1|
Sequence length 593
Comment small-conductance mechanosensitive channel [Thermosynechococcus sp. NK55]
Sequence
MIRYLNLFLAAVPAGLLIAQLTRTQRLRVALIEASQIVALVAIAVVTDWLLLKGIDQLQQ
RLHSKVSQHSQPWFSLVASLLRLTLRVLLWALILSWVLQSVESLAPWQGHIENAIQFLLQ
RVGVVFNTPLIELGRTKITLNFLFLVVFLFVLVIFTSRWISEWLKDRILAQLRVDRGSQE
TVTRVVSYSLSFIGFIVVLQTAGIDLSSLTVLAGVLGIGFGFGLQTLASNFISGLALLLE
RPIKVGDFIEVDGLLGTVEKISIRATIIRTNDSQYVIVPNNRFIEKNVVNWSYGSPDSRI
HIPVSVAYGSDTVLVTEALLSAARQDPRVLLTPPPSVWFRGFGQSAYLFELLVWINRPQD
SEPIKSALNFLIEQELRQRHIEVPFPQLDLRLRDLGELRSLTQYYQHSEAKDAEPPTAAE
PTVEKTPQAKLSLADMLRNISYFSHCSNAQLQMLIELGTRQFYGRGEAICREGSPGDAFY
IVLEGSVEVYSEQLDQILATLYGGSFFGEISVLTGMPRSATVRALEATSLFVVPRSAVQR
LLQAHPQLAEEIAHELAARQQVLQELGLVNSQEIKSLPPLQWIRHRLQTLFNV
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Identical sequences V5V7J6
gi|571028776|ref|YP_008900896.1|

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