SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|571028958|ref|YP_008901078.1| from Thermosynechococcus sp. NK55

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|571028958|ref|YP_008901078.1|
Domain Number 1 Region: 166-434
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.7e-72
Family Extended AAA-ATPase domain 0.0000000403
Further Details:      
 
Domain Number 2 Region: 421-614
Classification Level Classification E-value
Superfamily FtsH protease domain-like 1.44e-70
Family FtsH protease domain-like 0.00000253
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|571028958|ref|YP_008901078.1|
Sequence length 619
Comment ATP-dependent metalloprotease FtsH [Thermosynechococcus sp. NK55]
Sequence
MAIKNSPEVPRNRWIGNALLFLGLGFLLLNIFFPQLFAPRPPQVPYSMFIHQVQEGEVAR
VYLGQNEILYQLKPEGNKPPQVLATTPIFDLELPKRLEEKGVEFAAAPPPRNSWLLNILG
WVIPPIVFVLILQFFASRQVGGGPQGVLSISKSRAKVYVEGANTGIRFEDVAGVEEAKAE
LVEIVDFLKNPQRYIQIGARIPKGVLLVGPPGTGKTLLAKAVAGEANVPFFSISGSEFVE
LFVGVGSARVRDLFEQAKKQAPCIVFIDELDAIGKSRSSAGFYGGNDEREQTLNQLLTEM
DGFDATGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLSGREAILKIHAKKVKLA
PEVDLHAIAARTPGFAGADLANLVNEAALLAARNQREMVTQQDFAEAIERIVAGLEKKSR
VLNDKEKKIVAYHEVGHALVGCALPGSGRVEKISIVPRGMAALGYTLQLPTEDRFLLDEQ
ELRAQIATLLGGRSAEEIVFGTITTGAANDLQRATDLAERMVRSYGMSKVLGPLAFEQQQ
SSFLTNNGMMLRAVSEETAQAIDREVKEIVESAHQQALSILKENRDLLEAIAQKLLEKEV
IEGEELHDLLAQVKTPAAA
Download sequence
Identical sequences V5V861
gi|571028958|ref|YP_008901078.1| WP_024125932.1.87165

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]