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Domain assignment for ENSTBEP00000005568 from Tupaia belangeri 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTBEP00000005568
Domain Number 1 Region: 274-391,419-501
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 5.49e-42
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0062
Further Details:      
 
Domain Number 2 Region: 66-111
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 0.00000116
Family Nicotinic receptor ligand binding domain-like 0.029
Further Details:      
 
Weak hits

Sequence:  ENSTBEP00000005568
Domain Number - Region: 213-272
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 0.0012
Family Nicotinic receptor ligand binding domain-like 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTBEP00000005568   Gene: ENSTBEG00000006427   Transcript: ENSTBET00000006465
Sequence length 502
Comment pep:known_by_projection genescaffold:TREESHREW:GeneScaffold_930:12602:101132:-1 gene:ENSTBEG00000006427 transcript:ENSTBET00000006465 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSPKVLLVLLGIFLILQSRVEPQMQGEYEASTHKDVYGLDPLLGGLLSEEIKPTAEGGVK
AGKLPEASRILNTILSNYDHKLRPGIGEKPTVVTVEISVNSLGPLSILDMXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPENEMIYKWDNFKLEINEKNSWKLFQ
FDFTGVSNKTEMISTPAGDFMVMTFFFNVSRRFGYVVVHNYVPSSVTTMLSWVSFWIKKE
SSPARTSLGITSVLTMTTLGTFSRKNIPRVSYITALDFYIAICFIFCFCALTEFTVLNFL
TYNQMKAHASPKLRHPRTRRRARARARARARARARQREEVFVCKIVTSEGNDGEERPSCS
AEQSLSPGSPQGPRKPCSKPICSKCRKGFKKYVCMIPNCEGSTWQQGHLCFHVYRLDNYS
RVVFPVAFFLFNVLYWLVCFNL
Download sequence
Identical sequences ENSTBEP00000005568 ENSTBEP00000005568

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