SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A077H064 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A077H064
Domain Number 1 Region: 152-494
Classification Level Classification E-value
Superfamily gp120 core 1.37e-170
Family gp120 core 0.000000000317
Further Details:      
 
Domain Number 2 Region: 543-668
Classification Level Classification E-value
Superfamily Virus ectodomain 9.1e-59
Family Virus ectodomain 0.00000803
Further Details:      
 
Domain Number 3 Region: 87-134
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000177
Family gp120 core 0.00016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A077H064
Sequence length 859
Comment (tr|A0A077H064|A0A077H064_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVKEIRKNCQRLWKWGTMLTMLLGMWMICSAAGNLWVTVYYGVPVWKEATTTLFCASDA
KAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNDMAEQMHEDIISLWDQSLKP
CVKLTPLCVTLNCTDLNNTETNNTAETKYMKEEMKNCSFNVSTRMRNKMQNEYALFYKLD
IVPIDNKSYTLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDNKFNGTGSCTNV
STVQCTHGIRPVVSTQLLLNGSLSEDEVVIRSENITDNAKTIIVQLNTAVKINCTRPGNN
TRKSIPMGPGKVIYATGEIVGNTRQAHCNLSKPQWAKTLKLVATKLREKFNNRTIAFNHS
SGGDPEIVMHSFNCGGEFFYCNTTQLFNGTWNGNWTDTWNGTWNETHPTSNDTITLPCRI
KQIINRWQEVGKAMYAPPIRGNITCSSNITGLLLTRDGGNQNETNGTETFRPGGGDMRDN
WRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMLGAMFLGFLGAAGSTMGAASITL
TVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWG
CSGRLICTTTVPWNASWSNKSLNEIWDNMTWMQWEKEIDNYTKLIYTLIEESQNQQEKNE
LDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSL
QTRLPAPRGPDRPEGIEGEGGERGREGSSRLVHGFLALIWDDLRSLCLFSYHRLRDLLLI
AARIVELLGRRGWEALTYWWNLLQYWIQELKNSAVSLLNATAIAVAEGTDRVIEVAQRIW
RAFIHIPRRIRQGFERALL
Download sequence
Identical sequences A0A077H064

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]