SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A078GG20 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A078GG20
Domain Number 1 Region: 33-89
Classification Level Classification E-value
Superfamily DNA-binding domain 7.19e-20
Family GCC-box binding domain 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A078GG20
Sequence length 328
Comment (tr|A0A078GG20|A0A078GG20_BRANA) BnaC09g39350D protein {ECO:0000313|EMBL:CDY25420.1} KW=Complete proteome; Reference proteome OX=3708 OS=Brassica napus (Rape). GN=GSBRNA2T00032614001 OC=Brassica.
Sequence
MEEEQPPAKKRNMGRSRKGCMKGKGGPQNATCTFRGVRQRTWGKWVAEIREPNRGTRLWL
GTFNTSVEAAMAYDEAAKKLYGHEAKLNLLHPQRQQQKQDVNRNLSFSGHGSSSWGYKLD
TVRGLELGLGTSNESRGSWSGGFSFLQEDDYHNSNRYLSSSGSNLFWLLPKRSSSQDQES
VNAASGSGGQTFSTKLKPQNLMMTPSDYGTSNGVWSRFLAGQQENKIDYDVSSSCGSSDN
KESVSAPSGESGDAGERLHRPEVEEETGYLEMENLLEIDDLGLLIGKNGDFKNWCCDEFQ
HAWNWFRAVFLKPDGPDSWTGFDHEPVI
Download sequence
Identical sequences A0A078GG20 A0A0D3EED9
XP_013608387.1.26608

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]