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Domain assignment for A0A078GJI5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A078GJI5
Domain Number 1 Region: 116-255
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.79e-44
Family B3 DNA binding domain 0.0049
Further Details:      
 
Domain Number 2 Region: 935-999
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000309
Family PB1 domain 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A078GJI5
Sequence length 1049
Comment (tr|A0A078GJI5|A0A078GJI5_BRANA) Auxin response factor {ECO:0000256|RuleBase:RU004561} KW=Complete proteome; Reference proteome OX=3708 OS=Brassica napus (Rape). GN=GSBRNA2T00035586001 OC=Brassica.
Sequence
MKAPSNGFHPNPAEGEKKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQ
TDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKINR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVIS
SDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMF
ETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP
FYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGLSLVQWM
SMQQNNPLSAGAAATTQLPSSYNLPNNFAPNDHSKLLNFQSPNLSPANTQFNKPNMVSHI
SQQMQAQPAMVQSQQQLQQQVQMSHQQLQQQHHQHQQQGGYNSGSVNNGVSVVSNQVSCQ
NQSAGFTQSQLQQQSILSNGAKMTHQNIVSAGNKGSSQMTAQELQFQQQLELHNSTQLLR
NQQEQSSMHSLQQNPQQLQMQQQQSSKPSPSQQLQMQLLQKLQQQQQSTPPPGSSSLQPQ
LSSLQQTQSHQLQQLLSSQNQQPLPQSNNNGFMQPPQIQASHHQQQGYMNNNKPIVRSQS
GHIDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQGQAVSVPASNPVQQGMVNLKSAGE
QYKFKGAVTDQIDVTTAGTTYCPDVVVGPGQQQQQTFPLPSFGFDGDLQQSQHPRNNLAF
AGNLEAVNPDALYSQKDFQNLVVPNYGNAPRDIETELSSASQSFGIPSIPFKSGGSNEIG
GINDSGIMNGGIWPNQAQRMRTYTKVQKRGSVGRSIDVTRYSGYEELRNDLARMFGIEGQ
LEDPQISDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSAEVQQMSLDGDLAAIPT
TNQACSETDSGNAWKVHYEDTSAAASFNR
Download sequence
Identical sequences A0A078GJI5 H9B4E5
XP_009149398.1.100322 XP_013641917.1.73403 Bra025720

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