SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A078JMU7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A078JMU7
Domain Number 1 Region: 71-131
Classification Level Classification E-value
Superfamily DNA-binding domain 6.21e-18
Family GCC-box binding domain 0.0014
Further Details:      
 
Domain Number 2 Region: 6-38
Classification Level Classification E-value
Superfamily DNA-binding domain 0.0000000654
Family GCC-box binding domain 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A078JMU7
Sequence length 339
Comment (tr|A0A078JMU7|A0A078JMU7_BRANA) BnaA10g29740D protein {ECO:0000313|EMBL:CDY68823.1} KW=Complete proteome; Reference proteome OX=3708 OS=Brassica napus (Rape). GN=GSBRNA2T00080379001 OC=Brassica.
Sequence
LLFDHAGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLR
RKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKF
RGLTAVTNFDMNRYNVKAILESPTLPIGSAAKRLKEANRPVPSMMMISNNVSESENNASG
WQNAAVQHHQGVDLSLLQQHQERYNGYYYNGGNLSSESARACFKQEDDQHHFLSNTQSLM
TNIDHQSSVSDDSVTVCGNVVGYGGYQGFAAPVNCDAYAASEFDYNARNHYYFAQQQQTQ
HSPGGDFPAAMTNNVGSNMYYHGEGGGEVAPTFTVWNDN
Download sequence
Identical sequences A0A078JMU7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]