SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A088SD06 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A088SD06
Domain Number 1 Region: 47-116
Classification Level Classification E-value
Superfamily Ribosomal L11/L12e N-terminal domain 5.1e-16
Family Ribosomal L11/L12e N-terminal domain 0.0015
Further Details:      
 
Domain Number 2 Region: 114-191
Classification Level Classification E-value
Superfamily Ribosomal protein L11, C-terminal domain 0.00000000013
Family Ribosomal protein L11, C-terminal domain 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A088SD06
Sequence length 345
Comment (tr|A0A088SD06|A0A088SD06_9TRYP) Ribosomal protein L11, putative {ECO:0000313|EMBL:AIN99601.1} KW=Complete proteome OX=5679 OS=Leishmania panamensis. GN=LPMP_272220 OC=Leishmaniinae; Leishmania; Leishmania guyanensis species complex.
Sequence
MLRRCAAWCLKARPKTVSIEPGSNRFLDPKVEAKAKDLFAVPEFPNKAVLHNWRFFIKAG
KAATGPPVGQEFSKLGLKAMDFAKAFNDRTKPHFKDDIELIVRIQVYFDKSYIFRIEPPP
TAWFLLRAIRKKRGETGPVGLRGNYCAYLTLEMCYEIAKMKQMSWGKVEYPPIEVRVRRV
VGQARRMGIAIIGVDTAHSSPVKGMTEKQYLEESERYRKVHMAQYETLKAKELESAPLIE
RLHRPNMAPLTNAQLEEGLKDANLLNALWKSSHPKSLFAQDSRDREMARRYLNTRGWFNE
MTPEEMRVVFLNYRLPEQPRQQQLGMTEGQVQSQAYWSRDAASPQ
Download sequence
Identical sequences A0A088SD06
XP_010700308.1.42505

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]