SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A089HS58 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A089HS58
Domain Number 1 Region: 260-559
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.2e-85
Family DNA repair protein MutS, domain III 0.00000173
Further Details:      
 
Domain Number 2 Region: 562-795
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.58e-61
Family ABC transporter ATPase domain-like 0.00000266
Further Details:      
 
Domain Number 3 Region: 2-112
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 4.45e-41
Family DNA repair protein MutS, domain I 0.0000249
Further Details:      
 
Domain Number 4 Region: 114-272
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 1.57e-27
Family DNA repair protein MutS, domain II 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A089HS58
Sequence length 951
Comment (tr|A0A089HS58|A0A089HS58_PAEDU) DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00825254} KW=Complete proteome; Reference proteome OX=44251 OS=Paenibacillus durus (Paenibacillus azotofixans). GN=PDUR_15815 OC=Paenibacillus.
Sequence
MAKYTPMIEQYLKVKEGAMDAFLFFRLGDFYEMFFDDALLASKELEITLTGREGGGDERI
PMCGVPYHSAEGYIQRLIEKGYKVAICEQLDDPATTKGMVRRDIVRVVTPGTVMEGKVLA
DKSNNYLVCVTELAGMTALAACDLTTGELYVTSSPTGADTLRGEIGLYEPAEIIGDGTLL
DSVRAGTLLGDKPVVYTPWEKKSEELARSQFGEAAWARLEPERAECLALLIAYLSETQRR
SLGQLSQISAYEPGNYMILDPFTRRNLELTETVRERSKKGSLLWLLDRTETSMGARLLRR
RIDKPLLQRSKVERRLEAVDYLYNQYIVREDLRLALKEIYDLERLTGRVAYGSANGRDLN
ALKLSLAQIPALKEQCLASGSSTLREIGEGIDECADLHEDIERAIVDDPPVSVRDGGLIR
PGYHARLDELREASSSGKRWIAELEAKERLATGIKSLKIGFNKVFGYYIEVTRSNLASLP
EGRYERKQTLANAERFVTPELKEKEALILEAQDKMTDLEYSLFSELRERLSSQIPRLQNL
AEKVAEIDVYQGLAAVSAEQRFVKPMLTEGYDLKIEGGRHPVVEAVLKDASFIANGSSLT
QDDGRILLITGPNMAGKSTYMRQVALICIMAQVGCFVPAEKAEIPVIDRIFTRIGAADDL
IGGQSTFMVEMADIQLMTDKATPRSLIIIDELGRGTSTSEGMAIAQAVIEYVHHHIGCKA
LVSTHFHELAHLEDSLNGLRNYSMAVQESGDKVTFLRKLIPGAADSSYGIYCARLAGLPG
SIIDRAYGLLQHIEHSTSANAPAEPVSMSRGHGSGPASAGSNLTDSRKNVSAAEAALENV
LGTAAESSTYPAAGSAANISSHTEGSLGASEAARRETAVHLADRVEEGGVVQLSIFGDEE
PRRGRKAAANQQGHSVADDIMAAVSGADLMNMTPLQAMQMLNDLKMKINKK
Download sequence
Identical sequences A0A089HS58
WP_042207004.1.3403

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]