SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A093NIK3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A093NIK3
Domain Number 1 Region: 13-357
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 7.19e-66
Family Integrin alpha N-terminal domain 0.00000481
Further Details:      
 
Domain Number 2 Region: 359-516
Classification Level Classification E-value
Superfamily Integrin domains 2.46e-33
Family Integrin domains 0.0013
Further Details:      
 
Domain Number 3 Region: 520-657
Classification Level Classification E-value
Superfamily Integrin domains 3.66e-25
Family Integrin domains 0.0056
Further Details:      
 
Domain Number 4 Region: 666-836
Classification Level Classification E-value
Superfamily Integrin domains 1.67e-18
Family Integrin domains 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A093NIK3
Sequence length 923
Comment (tr|A0A093NIK3|A0A093NIK3_PYGAD) Integrin alpha-4 {ECO:0000313|EMBL:KFW61835.1} KW=Complete proteome; Reference proteome OX=9238 OS=Pygoscelis adeliae (Adelie penguin). GN=AS28_03304 OC=Pygoscelis.
Sequence
LGNPNGESCGKTCLEERDNQWLGVSLSRQPKENGSIVACGHRWKNIFYIKNEHKLPYGIC
FAVSSDFRTELSRRICPCYIDHVRKFGENHGSCQAGMSSFYIEDLIIMGAPGSFYWTGSV
FVYNTTANTIHAYTDSNNQVKFGSYLGYSVGAGHFLTSASTEVIGGAPQQEQTGKAYIFS
IEKQLNILFELRGKKLGSYFGAAVCAVDLNSDGLSDLLVGAPMQSTVREEGRVYVYINSG
SEAKMVELNIELSGSDSYAARFGESIANLGDIDNDGFEDVAIGAPQEDNLKGVIYIYNGR
EEGITPSFSQRIQGHQVSNSLSMFGQSIASGIDADNNGYQDVAVGAFLSDSAVVLRTKPV
IIVEASLKHPNSINRTNFNCMENDQPAICMNLKICFTYTGREVPGYIVLLYNLSVDVNRK
VDTQARFYFSSNGTSDTISGNVKIYSKNIACKDHPAFMRKDVRDILTPVHVEASYHLGHH
ILQKRNVQEFSPLQPVLQRRKEKDVIKSKFIFARFCSQENCSADLRVSGKVAFPKPHDKK
TYLAVGSMKTLLLNISLLNVGDDAYETVLHIQIPKGLYFIRVLELEEKQIHCDVLDKEIH
AVKLECSVGYLYVDQKSKLDFSFLLDASSFTRAEDDLNIIINATCKNEDGNMLLDNTLTL
AVPLKYEIELNVHGFVSPASFVYGTDEKDSPVTCMKENINFTFHVINAGPGMAPNTNLEI
MIPNAFPPNDFKLFNTLDIKTTVGQCSYNRYPRNCSAAEKNENILKDVVTFFSKPAKRQM
YCMKNDSLCLQIYCKLGNMESGKEATVQLHLEATPSLLEMDDASALKFEVRATASPEKNA
KVIELHKDKKVTYVYLEGVHHQKPKYRVTVLIIGIGLIVGVTLFLLLSFILWKIGFFKRQ
YKPIPQDKNRRDSWSFTSGNKDD
Download sequence
Identical sequences A0A093NIK3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]