SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A096YQE1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A096YQE1
Domain Number 1 Region: 13-338
Classification Level Classification E-value
Superfamily Terpenoid synthases 2.16e-60
Family Squalene synthase 0.00084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A096YQE1
Sequence length 349
Comment (tr|A0A096YQE1|A0A096YQE1_BURTA) Squalene/phytoene synthase family protein {ECO:0000313|EMBL:AIP26826.1} OX=271848 OS=106301 / E264). GN=DR63_1356 OC=Burkholderiaceae; Burkholderia; pseudomallei group.
Sequence
MGNSTRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQR
LELLLSLRAQINGVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAA
VRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLP
GLLSEREDTMAERGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLSEYGLCAEDLLRPD
ASPRARPLMHALVRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASNDA
WLDPARASKVRRGDVYRIIAYSLPLAMSNRALRAWLDRLIADVEARLAA
Download sequence
Identical sequences A0A096YQE1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]