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Domain assignment for A0A0A8DU67 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0A8DU67
Domain Number 1 Region: 3-143
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.16e-48
Family Ribonuclease PH domain 1-like 0.0000139
Further Details:      
 
Domain Number 2 Region: 305-493
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.11e-47
Family Ribonuclease PH domain 1-like 0.000011
Further Details:      
 
Domain Number 3 Region: 451-550
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.68e-28
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 4 Region: 144-234
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.03e-27
Family Ribonuclease PH domain 2-like 0.002
Further Details:      
 
Domain Number 5 Region: 609-695
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.05e-23
Family Cold shock DNA-binding domain-like 0.00021
Further Details:      
 
Domain Number 6 Region: 225-327
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 4.19e-19
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.004
Further Details:      
 
Domain Number 7 Region: 553-630
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.47e-17
Family Eukaryotic type KH-domain (KH-domain type I) 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0A8DU67
Sequence length 702
Comment (tr|A0A0A8DU67|A0A0A8DU67_9XANT) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome OX=56458 OS=Xanthomonas sacchari. GN=SB85_05580 OC=Xanthomonadaceae; Xanthomonas.
Sequence
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFKGPIGAAKVGYKNGEYILNPTVSDLKESQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAINELTVEAGTKPSDWVAPAKNEA
MIAALKEAVGEQLAAAFQVRDKLQRRDAIAAIKKDVLAQLAPRATAENWVAADLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVQAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGNDFVVLS
DILGDEDHLGDMDFKVAGTADGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTTPRAELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGASAE
Download sequence
Identical sequences A0A0A8DU67
WP_043092562.1.48363

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