SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0A9WCU0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0A9WCU0
Domain Number 1 Region: 1-173
Classification Level Classification E-value
Superfamily BEACH domain 3.14e-65
Family BEACH domain 0.00000305
Further Details:      
 
Domain Number 2 Region: 296-471
Classification Level Classification E-value
Superfamily WD40 repeat-like 8.33e-18
Family WD40-repeat 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0A9WCU0
Sequence length 472
Comment (tr|A0A0A9WCU0|A0A0A9WCU0_LYGHE) Lysosomal-trafficking regulator {ECO:0000313|EMBL:JAG06272.1} OX=30085 OS=Lygus hesperus (Western plant bug). GN=CM83_48603 OC=Panheteroptera; Cimicomorpha; Miridae; Mirini; Lygus.
Sequence
LVRLPPFTKMFLSYQDNNFDWPDRTFHSMHTTWRLTSSESTTDVKELIPEFFFLPEFLFN
AEGFNFGVRQNGEVVDNVVLPPWAPDARLFILIHRQALESEHVREFLPHWIDLVYGYKQT
GKAAIDCINVFHPATYYGFDPDSILDPVLRTAGQTMVRMYGQTPKQLFRAAHPMVVKSLA
PTSVPPQVLPSVKGLQWGHYVGSPGDTAPLQISLHSHHTPITSLVALLSNDVFGLAQNST
LLLTYSKETPLSASVAGTTSVLDAALISWNHGDGVIRAKLRKDQVPFPAITCGVDSVALC
ASVPDCNQLWVTYVTGKIHVYTYKFDGVGGSLDLDPMPTCLVGHQSLVTSIALSRAFSIA
VSVSEDGSAIMWDINRLEYVRSLPLIAIPINLVSVSETLGDIATVGQDPGGSSNLRLHSI
NGVLVGSVSTREQITSLCFSSAPEGVSVNVVACGMCDGYIRLWSTWDLTPVG
Download sequence
Identical sequences A0A0A9WCU0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]