SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0B0NHB9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0B0NHB9
Domain Number 1 Region: 36-240
Classification Level Classification E-value
Superfamily BEACH domain 7.98e-79
Family BEACH domain 0.000000747
Further Details:      
 
Domain Number 2 Region: 295-495,523-565
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.14e-31
Family WD40-repeat 0.00089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0B0NHB9
Sequence length 567
Comment (tr|A0A0B0NHB9|A0A0B0NHB9_GOSAR) BEACH domain-containing lvsA {ECO:0000313|EMBL:KHG10466.1} KW=Complete proteome; Reference proteome OX=29729 OS=Gossypium arboreum (Tree cotton) (Gossypium nanking). GN=F383_12911 OC=Gossypium.
Sequence
MRVKIWTCQIPKPSPNLKNQWAVRHQKGKRNLRPDMRAGMTQRSPKFHYGSHYSSAGIVL
FYLLRLPPFSAENQKLQGCQFDHADHLFSSIRDTWLSAAGKGNTSDVKELIPEFFYMPEF
LENRFSLDLGEKQSGEKVGDVHLPPWAKGSAREFIRMHREALESDFVSENLHHWIDLIFG
YKQRGKAAEKAANVFYHYTYEGSVDIDAVTDPSMKASILAQINHFGQTPKQLFLKPHVKR
RSDRKLPPHPLKNSTLLVPHEIRKSSYSITQIVTFQEKILIGKANTKLKPRMYAKYVAWG
FPDLSLRFLSFDQDRLLSTHENLHLGNQTQCAGFSHDGHILVTGAEDGLVYVWKISEEHP
RASNRLMLEKVLCAHRSRITCLHVNQPYMLIVSGSDDCTVIIWDLSSLRFVRQLPEFPTS
VSAVYVNDLTGEIMTAAGTLFAVWSINGCCLAVISTSQVPSDYIISVTSSTFSDWLDTNW
YVTGHHDGAVKVWHMVHCTDIETISNSTSVGTTGGLPLDESPEYRLLLHKVLTFHKHPVT
SLFLTTDLKQLLSGDSGGHLLSWTLPP
Download sequence
Identical sequences A0A0B0NHB9

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]