SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0B3RSL3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0B3RSL3
Domain Number 1 Region: 164-297
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.0000000000001
Family Intein (protein splicing domain) 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0B3RSL3
Sequence length 353
Comment (tr|A0A0B3RSL3|A0A0B3RSL3_9RHOB) Type I secretion target repeat protein {ECO:0000313|EMBL:KHQ50957.1} KW=Complete proteome; Reference proteome OX=561184 OS=Mameliella alba. GN=OA50_04324 OC=Rhodobacteraceae; Mameliella.
Sequence
MAVFDFNDGGALVNSNGATPSITFDEEGITFVLSSAAGNPGTETVAYSPDTIEQLSISDF
TTGGAFTLNIAGTEPNQYFSGNGLQFTIGTYLSGTWNITFVAVDPNNGNALLPGSNYVVT
NATTSGQVITVPDSGAVYSQIRFTASNPGTNTITIDNLTANLLCFLEGTRIATPEGEKAV
QDLRAGDRVLTAGGGISTVQWLGEQPVETTLSNPSKVNPIRIRAGALAKNVPARDLLVSP
DHAIGIDGYLVNASALINGSSITREARMPSGGFTYFHVETGTHELLLAEGCAAESYVDFI
GREGFVNGTERAEAPAIPEMAAPRISAARHLPPAIRDALARRAEALGLASRAA
Download sequence
Identical sequences A0A0B3RSL3
WP_052244742.1.21834

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]