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Domain assignment for A0A0C2CYC3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0C2CYC3
Domain Number 1 Region: 934-1371
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.87e-135
Family Reverse transcriptase 0.0000408
Further Details:      
 
Domain Number 2 Region: 1530-1685
Classification Level Classification E-value
Superfamily Ribonuclease H-like 5.06e-36
Family Retroviral integrase, catalytic domain 0.007
Further Details:      
 
Domain Number 3 Region: 636-736
Classification Level Classification E-value
Superfamily Acid proteases 0.000000000274
Family Retroviral protease (retropepsin) 0.033
Further Details:      
 
Domain Number 4 Region: 241-342
Classification Level Classification E-value
Superfamily Viral glycoprotein ectodomain-like 0.000000628
Family Glycoprotein B-like 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0C2CYC3
Sequence length 1854
Comment (tr|A0A0C2CYC3|A0A0C2CYC3_9BILA) Integrase core domain protein {ECO:0000313|EMBL:KIH54827.1} KW=Complete proteome; Reference proteome OX=51022 OS=Ancylostoma duodenale. GN=ANCDUO_15024 OC=Ancylostoma.
Sequence
MAHCHVQDNRCKMTHGTVIWNTSPEASSACKFVKATDGVAYVTPTHVVMDSIQSAFTYKN
ITFNPIQIASWCLPNNSVAMDNGVFISLPEMHNFNPRTVFSQYPTLVQEINQKHFNASKI
LHLLNTVYQGKIRRTRNSSSIFENDLTNGEHISLINTVFELLDSAAFPKPFKYKPFPRRR
PRSLTNINNHKELSTILFRNKDHLLNKFIGNDSTTVAQHIALNTEPDFTLLNNDPSLTHE
QRQDHRHYELNTKMQFLKIKLEEVIKHDFNYLFDRICALTNFKIQSIKSIAQINPTSAAR
MLLNRNDIFAIHAGDVLMISKCKEVHVDEIYLNHNVNGVCYLYTPVRVGKTIYFVHPGTR
DLTVQSPQADCGHLPYGIYNDGTNHYKSPSGYTHVSHIHMNLPNDVVTQDFVFNSPPIFH
SDLAKLATDVYLIKNRLNSINTLSSSSTKMQKEIGLLDSMSEELEKETVHTIEYIESNAG
DILQSQKEKILHSVGLHSFVRTIVYIVLFVIVIILLALLYWYFNFIRIIFHFVTQPICVF
LSMLLTKITTRTRPTPSDSNPPNDRPKAIAKRINPKNPLVAYSCEDETINVRYSKPQEVS
IDLEAPSTSSSSRNPRPSKQPFLSFLPNVSQIERTDTTSTIYIPLIVDELSTVALFDTGA
AITVISERLARKLKRIMEPPVISEGIAANGTSIKLIGQVHFVLKVGKKSIESSAFVAEDD
QCSADLLLGNDTIRQFANKVSIDYKVREITFDQEVIPIITLGEPNSSDFSAPVYLLSHTI
LRPQTDNVVLGSLRSSFPNKWEFFVQDDPTIHLPYNVVIGKTLSCPELEGTVVLRIFNGN
FSPVNLNRGKLIATATYVGKEMEWPPIFSVYPSINQLENPTNFQKTLEYVPKEADVSEEM
PIFPSGNPLPLINRIRINRSLLSSDQSYQFNSLLEKYHKCFVGDDGDLGLYTGPITHKIN
FISHAKAPTQRPYRVPLEKRSEIKRQIEEMLRTRIIEPSTSKFASPIVLVRKGSNKDQWR
FTVDYRQINAITESETYCIPHVQDIIDLTSGKEIYTVLDFKSGFFQIPLEKKHKERTAFS
SFLGLYQFTVMAQGLKGAPGTFQRVANNLIRELKACCFAYIDDIIIASQSIEEHFQDLEE
VFIRILNFGMKLTAEKCSFFQTEVSYLGVLLSKNGTRLNPEKTASIANLPRPNDAKAVKS
FLGAASYFRRFIPRFSFIATPLNNLLTKNAQFIWTDDHENAFLTLKRALVRAPLLVPPTL
GQPYIIHTDASTIGIGACLLQKNPTTDREHPIAYCSRPLTKHEKNYAVIELEALAIVFAL
KHFYPYVANASITLVTDHAPLKSLMHRSDLVGRLAKYQMTIQAYDMKIEYRAGKHNTLCD
FLSRYPVMNVNSIQINSLPTLQEIQRSQLQSQYRGLIQFLLGKTEDPPAKFAQQLDKYSI
FNNTLYSNLHGSPKLLVPDRSMQIKIIAVFHDNPLIGSHLGIRKTYKSVSSKYFWPRIYN
DIAKYVKTCTVCQKVKTPSGNIIREELGSFPIPQRPFERIHTDIVGPLPQCIYGNKFISI
TVCAFSKFIICTPLPNQTTDMVIKALINDVISKHGIPNDIVSDRGSNYTSDLFAQLNKTL
GISNNFTTSYNHKANGQVERLVKVITDSLTSYCSQAKDLWSDFLQPIVFAYNCSVNDTTG
YSPFYVIFGRHPITWCDIIHQLPSRLSFATDSFSDQFEMALKTTIIDVGTQIAEKTVNYK
SGYDFQHKVVSKDISIGDLVLLRDDTVRPKFTNQWKGPFEVTQISRPNITIVSVICPSRP
QTVHIDRLKLYCARPTSPTEIPKDVGQPTRRSQRLLNKQNPSSLPAEQTVEKSQ
Download sequence
Identical sequences A0A0C2CYC3

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