SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0D0SR48 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0D0SR48
Domain Number 1 Region: 2-155
Classification Level Classification E-value
Superfamily N-terminal domain of MutM-like DNA repair proteins 4.58e-26
Family N-terminal domain of MutM-like DNA repair proteins 0.00048
Further Details:      
 
Domain Number 2 Region: 150-241
Classification Level Classification E-value
Superfamily S13-like H2TH domain 2.22e-23
Family Middle domain of MutM-like DNA repair proteins 0.0022
Further Details:      
 
Domain Number 3 Region: 240-290
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000169
Family C-terminal, Zn-finger domain of MutM-like DNA repair proteins 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0D0SR48
Sequence length 290
Comment (tr|A0A0D0SR48|A0A0D0SR48_STAGA) Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00635501} KW=Complete proteome; Reference proteome OX=1293 OS=Staphylococcus gallinarum. GN=SH09_04595 OC=Staphylococcus.
Sequence
MPELPEVEHVKRGIEPFVVDQKIVGVHFSNKVKEGKAANKETIIKGMELDTFQMFTQQFI
IEKVERRSKYIVFYLKKQHEHRILISHLGMAGGFFVVDKIEDITNTNYRKHWHVVFKLAN
GKLLVYSDIRRFGEIRNVASFDAYPSFLEIAPEPFEDGALSHYLSWFDKKLYQNKPIKQM
ILDHRVISGCGNIYACEALFRAGIHPARLSKDLKHQEREMVFYYVREVLEVGIKNGGTSI
SDYLHADGSKGTMQLHLNVYKQKQCKVCGTDIETQVIATRNSHFCPTCQK
Download sequence
Identical sequences A0A0D0SR48
WP_042738450.1.74134

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]