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Domain assignment for A0A0D9W948 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0D9W948
Domain Number 1 Region: 186-445
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 1.85e-44
Family ATP-dependent DNA ligase catalytic domain 0.00056
Further Details:      
 
Domain Number 2 Region: 452-601
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.86e-27
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.00082
Further Details:      
 
Domain Number 3 Region: 657-742
Classification Level Classification E-value
Superfamily BRCT domain 2.91e-19
Family DNA topoisomerase II binding protein 1, TopBP1 0.026
Further Details:      
 
Domain Number 4 Region: 802-912
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000016
Family DNA topoisomerase II binding protein 1, TopBP1 0.041
Further Details:      
 
Domain Number 5 Region: 99-206
Classification Level Classification E-value
Superfamily ATP-dependent DNA ligase DNA-binding domain 0.000000144
Family ATP-dependent DNA ligase DNA-binding domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0D9W948
Sequence length 1301
Comment (tr|A0A0D9W948|A0A0D9W948_9ORYZ) DNA ligase {ECO:0000256|RuleBase:RU000617} KW=Complete proteome; Reference proteome OX=77586 OS=Leersia perrieri. GN= OC=Oryzoideae; Oryzeae; Oryzinae; Leersia.
Sequence
MAARVRFGLLVAMFQAMSKDRTAAKKRGRLRVLLDSAYGDSGRDDYFSALRLVLPGLDRE
RGSYGLKEAALASALVDALGIAKDSPDAVRLTNWRRGGSFRNAGNFALVAAEVLQRRQGM
TSGGLTIKEVNDALDHLAATENRSEKASILSSLIKKTNALEMKWLLMIILKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLNDRSQRHKRQDIEVGKAVRPQLAMRVSNASSAW
KKLNGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAAGMSKVIKENILVDRCIL
DGEMLVWDTVLNRFAEFGSNQEIAKAAQEGLETDRQRSPYIAFDILYAGDTSIIHQSLIE
RHEILRKVVRPLKGHLEILVPTGGLNIHRPPDEPCWSILAHNIDDVEKFFKDTVDNREEG
IVLKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGGEVAQFLVGLAV
PSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKYEYPKKPPRFYEVTNHSKERP
DVWIESPDKSIIMSITSDIRMIKSEVFAAPYSLRFPRIQRLRYDKPWHECLDVQAFVDIV
NSSNGTTHRAADDDNGLKNVNLKPSKTNKKVEKKNVSIIPSHLMKTDISGLKGETLIFAN
SMFYFVNIPPSYNLDYFHKLVVENGGSFSMNLNDSVTHCIAAEKKGIKYQAATRQGRIIH
YSWILDCCKEKQLLHLQPKYILFLADFARHKFPEEIDSYADYFYCDIDISDLKQIFSNMD
KADVDSTMVQRYKKKYCADKRFCFFQGCCVYFYHAPLVNADYNVISDLALKRVKQDLTMH
GGQVCSILAPATHLIIVSVLQTYNFDMLYKSLPPADRRYLHDKRLHVVSNKWLEDSVEKQ
TKLPESTYSLKPDTLEEIEIERSEEVVQPSINKHEKNEEIDRSQVKHGTRKRGRPSSSAS
RTAKPAPKPVRRTRARRGNQHAKIDDVELEEIDHGEAGQDGQIPDRDNTSKMEVDSLDRD
QVPPRPARRTRARREKENPKVHYGESEESDPGETGQGDQKSDADYICKIEEDSSNRDQGP
HQVAPRAARRSRVQRGKQHAKIDYGESEESGPGETGQDDKMLDTDSIVKMEQNTHDKDQE
PPPGAQLITLDEQETKGLKWSTMETPSGPKHESNDTVLRTNTAEATSSSTTCDKMEQMVD
PLRAMLLDMLPSLGLRKTGDGNKVPEAKYEKNPPWVGSSTSNYEAPVPQAASSASNSGVP
APHAGSSTQSTGFPAADPTAGAPKKKKVSYKDVADELLKDW
Download sequence
Identical sequences A0A0D9W948

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