SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0E0C6A8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0E0C6A8
Domain Number 1 Region: 1126-1271
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.23e-41
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.0000281
Further Details:      
 
Domain Number 2 Region: 918-1119
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 4.89e-38
Family ATP-dependent DNA ligase catalytic domain 0.0000293
Further Details:      
 
Domain Number 3 Region: 723-904
Classification Level Classification E-value
Superfamily ATP-dependent DNA ligase DNA-binding domain 3.53e-35
Family ATP-dependent DNA ligase DNA-binding domain 0.00017
Further Details:      
 
Domain Number 4 Region: 62-349
Classification Level Classification E-value
Superfamily Metallo-hydrolase/oxidoreductase 1.02e-24
Family Zn metallo-beta-lactamase 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0E0C6A8
Sequence length 1285
Comment (tr|A0A0E0C6A8|A0A0E0C6A8_9ORYZ) Uncharacterized protein {ECO:0000313|EnsemblPlants:OMERI01G24670.7} KW=Complete proteome; Reference proteome OX=40149 OS=Oryza meridionalis. GN= OC=Oryzoideae; Oryzeae; Oryzinae; Oryza.
Sequence
MAYLFSSPDSKSLSVATSTLFLSSLASLPSLHSEPPSASASASAASPLSPVPASVPATAL
IPGSRFLVDAFRHAGDFTASYFLSHFHSDHYTGLGPSWRRGLVFCSPLTARLLVSVLSVP
PQLVVVLDAGRYVHTGDFRFSQSMITEPNLLEFIGADAVFLDTTYCNPKFTFPPQEESLE
YVVNSIKRVKEESRAFGERVLCLIATYVVGKERILLEVARRCGCKIHVDSRKMEILTLLG
IGGEDGVFTEDAAATDVHVTGWNILGETWPYFRPNFVKMKEIMVERGYNKAVGFVPTGWM
YETKKEGFAVRTKDSLEIHLVPYSEHSSYDELRDYVKFLHPKRVIPTVGLDGGKLDSKEA
FALQKHFAGLVDETANKQEFLMAFHRSSRNATLGPEDAVTGLSQQEGEVQEMEEATLLPA
SLAFERSDSFQEKITVEMKKELSDFLPSWVSQDLILDLLIKSGGDVVQAATDFFEKERDF
FEEANVYNSETPKSEIDLSSDHGSSADANSQQEVPLFSQKPMDHSSKLLNLNAMRMKSNI
SKRERKRGSNSADKPKKKGRSTAFKPLTESSGCKQSTITNYFSRTMLSASKSDTSDEVTV
DANQNNVRNDDQFTEVVESEKQSVSQLLQIVDGGMSRESAISLLEKAKGDVNVAVDIFYS
KTDNSNVLENDMNIVTQNTENEMTDKSSSTGLLRNSSEATPKMPNLCVQSYVAQADSVCI
SLPIEKYLPIEHACWTAGQPAPYLHLARTFDLVEREKGKIKTTSMLCNMFRSLLALSPDD
VLPAVYLCTNKISPDHENIVMLPKNAARTKCYLLLLVPSQFAIEMEMKFLVRTLVRNLRI
GVMMKTILPALAHAVVIDGKYSNSPVLSLEGIKPQLQELSTEVAEAYNVIPNLDLLIPSL
LREGTAFSASSLAMITGTPIPPMLARYDGQRAQIHRSNDGCVQIFSRQMKESTSRFPDLV
GMIKELCSIEVSSFILDAEVVGIDRKKGNKLMSFQELSSRERGSKHSSIAIQNIKVDICV
FVFDIMFCNGQSLLNCSLRQRRKYIHDLFQEKPGHFELAQQLTVEADEASVDNSTTLERM
NTFFKMACQSSCEGIMLKTLDVDAGYSASKRCDSWLKVKRDYVGLGDSLDLVPIGAWYGN
GRKAGWYSPFLMACYNPEYEEFQSVCRVMSGFSDEFYKEMKEFYSGDRILPKKPVYYKTD
ELPELWFSAEQVWEIRGADLTLSPVHHAAIGLVHPSRGISVRMPRYIRSRPDRSPEDCST
ATDVATLFKAQTRKMEERGHHLAYA
Download sequence
Identical sequences A0A0E0C6A8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]