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Domain assignment for A0A0F2SMF1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0F2SMF1
Domain Number 1 Region: 50-170
Classification Level Classification E-value
Superfamily Insert subdomain of RNA polymerase alpha subunit 3.14e-44
Family Insert subdomain of RNA polymerase alpha subunit 0.0000397
Further Details:      
 
Domain Number 2 Region: 5-54,146-230
Classification Level Classification E-value
Superfamily RBP11-like subunits of RNA polymerase 2.16e-30
Family RNA polymerase alpha subunit dimerisation domain 0.0014
Further Details:      
 
Domain Number 3 Region: 247-311
Classification Level Classification E-value
Superfamily C-terminal domain of RNA polymerase alpha subunit 1.44e-22
Family C-terminal domain of RNA polymerase alpha subunit 0.0000617
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0F2SMF1
Sequence length 315
Comment (tr|A0A0F2SMF1|A0A0F2SMF1_9FIRM) Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059} KW=Complete proteome; Reference proteome OX=1629714 OS=Peptococcaceae bacterium BRH_c23. GN=VR66_01465 OC=Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.
Sequence
MLEIEKPRIECIERSEDNSYAKFIVEPLERGYGITLGNSLRRILLSSLEGSAVTSVKIEG
VLHEFSTIPGVLEDVTDIILNLKSLALKGYTDEPKVIRIEAQGEGVVMAGDIITDPDIEI
LNTDLKIATLDHDGRLFMEMTVERGRGYVPADKNKKPDHVIGVIPIDSIFAPIYKVNYTV
EDTRVGQITDYDKLTLEAWSNGSISPEEATSSAAKILSEHLRLFMGLTDKLNSVEVLVEK
EEEAKDKILEMTIEELDLSVRSYNCLKRAGINSVEELTQKTEEDMIKVRNLGRKSLEEVE
FKLKDLGLSFRPAED
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Identical sequences A0A0F2SMF1

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