SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0F4QH45 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0F4QH45
Domain Number 1 Region: 6-105
Classification Level Classification E-value
Superfamily DnaK suppressor protein DksA, alpha-hairpin domain 1.31e-35
Family DnaK suppressor protein DksA, alpha-hairpin domain 0.00000474
Further Details:      
 
Domain Number 2 Region: 106-144
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000131
Family Prokaryotic DksA/TraR C4-type zinc finger 0.00086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0F4QH45
Sequence length 147
Comment (tr|A0A0F4QH45|A0A0F4QH45_9GAMM) RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926} KW=Complete proteome; Reference proteome OX=43658 OS=Pseudoalteromonas rubra. GN=TW77_17065 OC=Pseudoalteromonadaceae; Pseudoalteromonas.
Sequence
MPDQKKLGLLAQAGLEPYQEKPGEEYMNDAQRAHFKKLLEAWRSDLRNEVDRTKTHMQDE
AANFPDPVDRAAQEEEFSLELRTRDRERKLIKKIEKTLQLIEDDDFGYCDSCGIEIGIRR
LEARPTADLCVDCKSIAEIKEKQQGRG
Download sequence
Identical sequences A0A0F4QH45
WP_046006190.1.7195

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]