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Domain assignment for A0A0H4VDX7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0H4VDX7
Domain Number 1 Region: 5-144
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.59e-51
Family Ribonuclease PH domain 1-like 0.0000226
Further Details:      
 
Domain Number 2 Region: 303-492
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.62e-48
Family Ribonuclease PH domain 1-like 0.0000146
Further Details:      
 
Domain Number 3 Region: 450-547
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.81e-26
Family Ribonuclease PH domain 2-like 0.00016
Further Details:      
 
Domain Number 4 Region: 145-234
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.78e-26
Family Ribonuclease PH domain 2-like 0.0016
Further Details:      
 
Domain Number 5 Region: 608-693
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 7.71e-22
Family Cold shock DNA-binding domain-like 0.00021
Further Details:      
 
Domain Number 6 Region: 228-326
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 1.44e-18
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0038
Further Details:      
 
Domain Number 7 Region: 552-629
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 5.31e-18
Family Eukaryotic type KH-domain (KH-domain type I) 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0H4VDX7
Sequence length 768
Comment (tr|A0A0H4VDX7|A0A0H4VDX7_9SPHN) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome; Reference proteome OX=1648404 OS=Erythrobacter atlanticus. GN=CP97_11645 OC=Erythrobacteraceae; Erythrobacter.
Sequence
MFDKKTVSIEWGGKTLTLETGQIARQADGAVLATYGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSSAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDIVAMIAASAALTISGLPFMGPIGAARVGYVDGEYVLNPSVNTIFDEGELDLVV
AATNDAVMMVESEAKELSEDVMLGAVMFAHEESRKVIGAIINLAEQAAKDPWEVDLSDDT
SAIKENLRGIVGDDIAAAYKLTDKSQRSDALNIARAKAKEAYADAEGQTQMSANKAVKKL
EAEIVRGAILKEGQRIDGRKTNEIRPIEAMVGLLPRTHGSALFTRGETQAICTTTLGTKD
AEQMIDGLEGLSYNHFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAWRALHPVLPAHED
FPYTIRILSDITESNGSSSMATVCGGCLAMMDAGVPIENPVSGIAMGLILEGDDYTVLSD
ILGDEDHLGDMDFKVAGSARGITSLQMDIKVAGITQEIMQTALAQASEGRAHILGEMTKA
LGTARGEVSRHAPRIETMQIDKAKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
DSDQIDAAKKWIEGIVEEAEVGKIYEGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGQDVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPREKREGGGGGGRGG
DRRGPRGGGSGRGGDRGPRGGGGGRGGDRGGNDAGGNADHMPAFLKDD
Download sequence
Identical sequences A0A0H4VDX7
WP_048886081.1.64584

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