SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0J6YXP5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0J6YXP5
Domain Number 1 Region: 2-340
Classification Level Classification E-value
Superfamily Terpenoid synthases 9.06e-56
Family Squalene synthase 0.00019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0J6YXP5
Sequence length 370
Comment (tr|A0A0J6YXP5|A0A0J6YXP5_9BACT) Squalene/phytoene synthase {ECO:0000313|EMBL:KMP11748.1} KW=Complete proteome; Reference proteome OX=1628279 OS=Nitrospina sp. SCGC_AAA799_C22. GN=UZ36_03200 OC=Nitrospinales; Nitrospinaceae; Nitrospina.
Sequence
MDDWNYCITTLPKVSRTFALNISVLKGELHRSILIAYLFCRTVDTVEDAGELDAPTKIKL
LLDFAALMKNSTNRNQDLDRWLKDIAVVDGSESDLDLLRNIRRVFNSFDSLEENHKQQII
PSVCTMAQGMAYFQKKFDSEQITLLENAEELEEYCYFVAGAVGEMLRNLFFQALPGLPSP
NRETMRRTAVSFGLGLQITNISKDIVVDRGRGWSYVPKSYMAENGLTAEEFHAGASTEKD
LKVLECLLNKTVGHLNDALDFTLAIPRRNMRLRLFCIWPLWMAMETVAVLHDNHDLLKSD
ANVKISRQTVRRILRRTPFICWSNGLLNRSFENILQRDAFQNPARFNLDGLKRRLSDLAL
DDIPQKTQVA
Download sequence
Identical sequences A0A0J6YT04 A0A0J6YXP5

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]