SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0P1AGW7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0P1AGW7
Domain Number 1 Region: 319-618
Classification Level Classification E-value
Superfamily BEACH domain 2.09e-114
Family BEACH domain 0.0000000466
Further Details:      
 
Domain Number 2 Region: 747-1046
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.5e-42
Family WD40-repeat 0.0081
Further Details:      
 
Domain Number 3 Region: 231-317
Classification Level Classification E-value
Superfamily PH domain-like 2.74e-18
Family PreBEACH PH-like domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0P1AGW7
Sequence length 1111
Comment (tr|A0A0P1AGW7|A0A0P1AGW7_9STRA) Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins {ECO:0000313|EMBL:CEG40322.1} KW=Complete proteome; Reference proteome OX=4781 OS=Plasmopara halstedii. GN= OC=Plasmopara.
Sequence
MHKRHRCNKNIYTTRFSLLLLEDGEVFLDDHSACRYLEPHTFTHRKVFGRIKVCTRGLFF
VPLDLQLPILRFPYRCMSAEPVAECFLQAPLIFERIDESNDRSLVYVTFQTKQVIEMRER
GTDHPYRYRDTTEGLDSTSSSDSLSNSSSSSLNGDRPAKYIFTLQHVAYEAFLASIHVLF
EVSNLPRQMLIHSEEATLLAPILAPRMTDKFDSSLIIDYREKLLMTNGCVVDRIEPLLKF
PGCLMLTNLRLYFQPAQLNNIFDPVSKWDYTSIDQVYKRRYLLQQIGLEIYLRNKDSIFF
SFQSAKERDNFYALIISQPELQRCRRKDLQSMMQKWQNRELSNFEYLQFLNNASGRTCND
LTQYPVFPWILRDYTSSNLDLNDSDAYRDLSKPIGALNEERLKYLKARYDMMPYGEKAEG
MPPPFLYGTHYSTPGYVLYFLVRKVPEYMLCLQGGKFDAPDRLFRSIKSTWDGCLSNHTD
VKELIPEFFDTSLQADEWLQNIKHLDLGLTQSFDRVDDVELPPWAHGSPREFVRLNRAAL
ESDYVSDHLHCWIDLIFGYKQQGDEALKANNLFYYLSYEGSVDLEAIDDPVQKRSLESQI
QEFGQTPKQLFSSPHPSRNEGKGRVEVATLDLLLSPRILVPQVHRILNSVDNIVNFRPAH
QKVMTASVFEEYTDSEDEMENVISCHDKRNCCWYSLNCFQSVCSRLPTVFNRLSTQLWGN
HLTSGKPLKNWRWKFRLRSKYSLATTWSWKQTSSCRLHRGEVTSIILTKDNSSFFTTSKD
KSLKLVSTQNTAVIRNVSGEYALSCCDLSPDESILFVGSWDNSVYMHSVSSGVVLDKVLA
HSDGISAICVLQDRFFTSSWDSSIKLWRYTSQFIVTTPIRTFFDCEESVLCLDVSRDGRF
GAAGTRNGSVFLFDLYAVILHHQVQASSSFGGGISSITFAQDNKSYVCVTVQNQLLQYNL
RGELLWSMDIQTTGQVRSFDSDGTYAVGGTTSGKILFWKMHEHAGTEVVCEIPQAHDACI
TSLTVSTSGSVLVSGAVDGSINVWNLLKKAPLSQTKACNLSNRKVMFDYGSIQTSSSILP
SFQTKKTSSYTNLYISNYTSQFAEAEYYLEY
Download sequence
Identical sequences A0A0P1AGW7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]